Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTSDP07339 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTSDP07339 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CTSDP07339 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.89■□□□□ 0.29
CTSDP07339 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
CTSDP07339 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTSDP07339 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CTSDP07339 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.88■□□□□ 0.29
CTSDP07339 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC16.88■□□□□ 0.29
CTSDP07339 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CTSDP07339 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTSDP07339 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.88■□□□□ 0.29
CTSDP07339 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTSDP07339 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CTSDP07339 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTSDP07339 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CTSDP07339 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.88■□□□□ 0.29
CTSDP07339 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTSDP07339 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.88■□□□□ 0.29
CTSDP07339 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CTSDP07339 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTSDP07339 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.88■□□□□ 0.29
CTSDP07339 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CTSDP07339 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CTSDP07339 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC16.88■□□□□ 0.29
CTSDP07339 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC16.88■□□□□ 0.29
CTSDP07339 AC131281.2-201ENST00000520478 145 ntBASIC16.88■□□□□ 0.29
CTSDP07339 MIR4466-201ENST00000606121 54 ntBASIC16.88■□□□□ 0.29
CTSDP07339 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CTSDP07339 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CTSDP07339 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTSDP07339 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CTSDP07339 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CTSDP07339 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTSDP07339 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.88■□□□□ 0.29
CTSDP07339 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTSDP07339 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTSDP07339 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTSDP07339 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CTSDP07339 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.88■□□□□ 0.29
CTSDP07339 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CTSDP07339 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CTSDP07339 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTSDP07339 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
CTSDP07339 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTSDP07339 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTSDP07339 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTSDP07339 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTSDP07339 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CTSDP07339 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CTSDP07339 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTSDP07339 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.87■□□□□ 0.29
CTSDP07339 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTSDP07339 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTSDP07339 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CTSDP07339 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CTSDP07339 AC233992.3-201ENST00000607491 485 ntBASIC16.87■□□□□ 0.29
CTSDP07339 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTSDP07339 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC16.87■□□□□ 0.29
CTSDP07339 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC16.87■□□□□ 0.29
CTSDP07339 MIR2861-201ENST00000636310 90 ntBASIC16.87■□□□□ 0.29
CTSDP07339 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTSDP07339 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTSDP07339 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.87■□□□□ 0.29
CTSDP07339 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
CTSDP07339 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CTSDP07339 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTSDP07339 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CTSDP07339 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CTSDP07339 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CTSDP07339 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.86■□□□□ 0.29
CTSDP07339 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTSDP07339 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTSDP07339 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC16.86■□□□□ 0.29
CTSDP07339 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CTSDP07339 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
CTSDP07339 AC126544.1-201ENST00000580842 1059 ntBASIC16.86■□□□□ 0.29
CTSDP07339 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CTSDP07339 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CTSDP07339 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTSDP07339 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTSDP07339 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.86■□□□□ 0.29
CTSDP07339 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CTSDP07339 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTSDP07339 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CTSDP07339 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTSDP07339 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTSDP07339 TMEM179-206ENST00000616017 1645 ntBASIC16.85■□□□□ 0.29
CTSDP07339 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CTSDP07339 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTSDP07339 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTSDP07339 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTSDP07339 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTSDP07339 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTSDP07339 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.85■□□□□ 0.29
CTSDP07339 LHPP-203ENST00000392757 840 ntTSL 3 BASIC16.85■□□□□ 0.29
CTSDP07339 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CTSDP07339 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CTSDP07339 AICDA-202ENST00000537228 667 ntTSL 5 BASIC16.85■□□□□ 0.29
CTSDP07339 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms