Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
APOC1P02654 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.93■□□□□ 0.46
APOC1P02654 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
APOC1P02654 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.93■□□□□ 0.46
APOC1P02654 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
APOC1P02654 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
APOC1P02654 FP700111.2-201ENST00000619190 1892 ntBASIC17.92■□□□□ 0.46
APOC1P02654 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
APOC1P02654 LINC01006-201ENST00000333319 2292 ntBASIC17.92■□□□□ 0.46
APOC1P02654 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
APOC1P02654 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
APOC1P02654 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.92■□□□□ 0.46
APOC1P02654 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.92■□□□□ 0.46
APOC1P02654 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
APOC1P02654 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
APOC1P02654 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.92■□□□□ 0.46
APOC1P02654 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
APOC1P02654 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
APOC1P02654 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.92■□□□□ 0.46
APOC1P02654 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
APOC1P02654 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
APOC1P02654 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.92■□□□□ 0.46
APOC1P02654 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
APOC1P02654 AC027702.1-201ENST00000563810 1770 ntBASIC17.91■□□□□ 0.46
APOC1P02654 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
APOC1P02654 AL157384.1-201ENST00000445995 2473 ntBASIC17.91■□□□□ 0.46
APOC1P02654 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
APOC1P02654 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.91■□□□□ 0.46
APOC1P02654 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
APOC1P02654 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.91■□□□□ 0.46
APOC1P02654 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
APOC1P02654 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
APOC1P02654 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
APOC1P02654 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
APOC1P02654 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
APOC1P02654 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
APOC1P02654 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
APOC1P02654 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.91■□□□□ 0.46
APOC1P02654 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.91■□□□□ 0.46
APOC1P02654 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
APOC1P02654 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
APOC1P02654 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
APOC1P02654 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.91■□□□□ 0.46
APOC1P02654 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
APOC1P02654 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
APOC1P02654 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
APOC1P02654 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.91■□□□□ 0.46
APOC1P02654 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
APOC1P02654 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.9■□□□□ 0.46
APOC1P02654 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
APOC1P02654 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
APOC1P02654 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
APOC1P02654 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
APOC1P02654 AC004854.2-201ENST00000608450 1441 ntBASIC17.9■□□□□ 0.46
APOC1P02654 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.9■□□□□ 0.46
APOC1P02654 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
APOC1P02654 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
APOC1P02654 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
APOC1P02654 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.9■□□□□ 0.46
APOC1P02654 ZNRF2P3-201ENST00000424200 374 ntBASIC17.9■□□□□ 0.46
APOC1P02654 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
APOC1P02654 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
APOC1P02654 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.9■□□□□ 0.46
APOC1P02654 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
APOC1P02654 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
APOC1P02654 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
APOC1P02654 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
APOC1P02654 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.9■□□□□ 0.46
APOC1P02654 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
APOC1P02654 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
APOC1P02654 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
APOC1P02654 AC020907.5-201ENST00000624372 1936 ntBASIC17.9■□□□□ 0.46
APOC1P02654 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
APOC1P02654 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
APOC1P02654 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
APOC1P02654 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
APOC1P02654 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
APOC1P02654 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
APOC1P02654 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
APOC1P02654 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
APOC1P02654 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
APOC1P02654 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
APOC1P02654 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
APOC1P02654 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
APOC1P02654 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
APOC1P02654 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.89■□□□□ 0.45
APOC1P02654 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
APOC1P02654 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.89■□□□□ 0.45
APOC1P02654 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.89■□□□□ 0.45
APOC1P02654 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.89■□□□□ 0.45
APOC1P02654 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
APOC1P02654 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
APOC1P02654 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
APOC1P02654 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.89■□□□□ 0.45
APOC1P02654 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
APOC1P02654 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
APOC1P02654 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
APOC1P02654 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.89■□□□□ 0.45
APOC1P02654 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
APOC1P02654 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms