Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC15.32■□□□□ 0.04
LTAP01374 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC15.32■□□□□ 0.04
LTAP01374 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LTAP01374 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LTAP01374 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC15.32■□□□□ 0.04
LTAP01374 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC15.32■□□□□ 0.04
LTAP01374 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LTAP01374 EEF1DP3-203ENST00000566025 782 ntBASIC15.32■□□□□ 0.04
LTAP01374 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LTAP01374 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
LTAP01374 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LTAP01374 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LTAP01374 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LTAP01374 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC15.32■□□□□ 0.04
LTAP01374 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LTAP01374 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LTAP01374 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LTAP01374 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LTAP01374 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LTAP01374 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LTAP01374 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
LTAP01374 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LTAP01374 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LTAP01374 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LTAP01374 POLI-202ENST00000406285 2030 ntTSL 2 BASIC15.31■□□□□ 0.04
LTAP01374 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LTAP01374 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC15.31■□□□□ 0.04
LTAP01374 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LTAP01374 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC15.31■□□□□ 0.04
LTAP01374 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LTAP01374 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LTAP01374 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LTAP01374 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LTAP01374 BX842568.3-201ENST00000418104 571 ntBASIC15.31■□□□□ 0.04
LTAP01374 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LTAP01374 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LTAP01374 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LTAP01374 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC15.31■□□□□ 0.04
LTAP01374 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LTAP01374 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
LTAP01374 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC15.31■□□□□ 0.04
LTAP01374 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LTAP01374 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LTAP01374 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LTAP01374 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC15.31■□□□□ 0.04
LTAP01374 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC15.31■□□□□ 0.04
LTAP01374 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LTAP01374 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LTAP01374 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
LTAP01374 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
LTAP01374 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC15.31■□□□□ 0.04
LTAP01374 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LTAP01374 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
LTAP01374 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LTAP01374 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LTAP01374 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LTAP01374 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LTAP01374 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LTAP01374 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LTAP01374 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LTAP01374 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LTAP01374 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.3■□□□□ 0.04
LTAP01374 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LTAP01374 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC15.3■□□□□ 0.04
LTAP01374 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LTAP01374 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LTAP01374 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LTAP01374 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC15.3■□□□□ 0.04
LTAP01374 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LTAP01374 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC15.3■□□□□ 0.04
LTAP01374 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LTAP01374 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
LTAP01374 MIR2861-201ENST00000636310 90 ntBASIC15.3■□□□□ 0.04
LTAP01374 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LTAP01374 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LTAP01374 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LTAP01374 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
LTAP01374 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LTAP01374 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LTAP01374 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LTAP01374 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC15.29■□□□□ 0.04
LTAP01374 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LTAP01374 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LTAP01374 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LTAP01374 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC15.29■□□□□ 0.04
LTAP01374 AC004408.2-201ENST00000623613 2777 ntBASIC15.29■□□□□ 0.04
LTAP01374 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC15.29■□□□□ 0.04
LTAP01374 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LTAP01374 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LTAP01374 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LTAP01374 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
LTAP01374 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LTAP01374 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LTAP01374 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LTAP01374 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC15.29■□□□□ 0.04
LTAP01374 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC15.29■□□□□ 0.04
LTAP01374 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LTAP01374 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC15.29■□□□□ 0.04
LTAP01374 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LTAP01374 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms