Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MT-CO1P00395 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
MT-CO1P00395 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.86■□□□□ 0.93
MT-CO1P00395 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.86■□□□□ 0.93
MT-CO1P00395 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.86■□□□□ 0.93
MT-CO1P00395 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.86■□□□□ 0.93
MT-CO1P00395 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.86■□□□□ 0.93
MT-CO1P00395 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.86■□□□□ 0.93
MT-CO1P00395 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MT-CO1P00395 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
MT-CO1P00395 AC121338.2-201ENST00000622535 1744 ntBASIC20.86■□□□□ 0.93
MT-CO1P00395 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.86■□□□□ 0.93
MT-CO1P00395 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
MT-CO1P00395 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
MT-CO1P00395 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
MT-CO1P00395 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
MT-CO1P00395 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
MT-CO1P00395 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.86■□□□□ 0.93
MT-CO1P00395 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MT-CO1P00395 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
MT-CO1P00395 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MT-CO1P00395 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MT-CO1P00395 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.85■□□□□ 0.93
MT-CO1P00395 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.85■□□□□ 0.93
MT-CO1P00395 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.85■□□□□ 0.93
MT-CO1P00395 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
MT-CO1P00395 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MT-CO1P00395 PLK5-205ENST00000642079 1969 ntBASIC20.85■□□□□ 0.93
MT-CO1P00395 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.85■□□□□ 0.93
MT-CO1P00395 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
MT-CO1P00395 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
MT-CO1P00395 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
MT-CO1P00395 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MT-CO1P00395 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
MT-CO1P00395 AC097658.1-201ENST00000475555 843 ntBASIC20.85■□□□□ 0.93
MT-CO1P00395 CD99P1-205ENST00000527459 561 ntBASIC20.85■□□□□ 0.93
MT-CO1P00395 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MT-CO1P00395 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.85■□□□□ 0.93
MT-CO1P00395 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
MT-CO1P00395 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MT-CO1P00395 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
MT-CO1P00395 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MT-CO1P00395 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MT-CO1P00395 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MT-CO1P00395 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
MT-CO1P00395 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
MT-CO1P00395 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.84■□□□□ 0.93
MT-CO1P00395 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.84■□□□□ 0.93
MT-CO1P00395 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MT-CO1P00395 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
MT-CO1P00395 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MT-CO1P00395 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
MT-CO1P00395 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.84■□□□□ 0.93
MT-CO1P00395 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.84■□□□□ 0.93
MT-CO1P00395 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.84■□□□□ 0.93
MT-CO1P00395 AL589743.5-201ENST00000616611 1050 ntBASIC20.84■□□□□ 0.93
MT-CO1P00395 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MT-CO1P00395 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.84■□□□□ 0.93
MT-CO1P00395 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MT-CO1P00395 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MT-CO1P00395 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MT-CO1P00395 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MT-CO1P00395 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.83■□□□□ 0.93
MT-CO1P00395 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
MT-CO1P00395 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MT-CO1P00395 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MT-CO1P00395 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
MT-CO1P00395 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
MT-CO1P00395 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
MT-CO1P00395 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.83■□□□□ 0.93
MT-CO1P00395 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
MT-CO1P00395 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
MT-CO1P00395 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
MT-CO1P00395 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.83■□□□□ 0.92
MT-CO1P00395 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
MT-CO1P00395 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
MT-CO1P00395 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
MT-CO1P00395 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MT-CO1P00395 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MT-CO1P00395 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
MT-CO1P00395 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
MT-CO1P00395 AC087633.2-202ENST00000565166 1439 ntBASIC20.82■□□□□ 0.92
MT-CO1P00395 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MT-CO1P00395 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
MT-CO1P00395 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MT-CO1P00395 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.82■□□□□ 0.92
MT-CO1P00395 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.82■□□□□ 0.92
MT-CO1P00395 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.82■□□□□ 0.92
MT-CO1P00395 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.82■□□□□ 0.92
MT-CO1P00395 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
MT-CO1P00395 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MT-CO1P00395 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.82■□□□□ 0.92
MT-CO1P00395 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
MT-CO1P00395 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
MT-CO1P00395 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MT-CO1P00395 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MT-CO1P00395 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MT-CO1P00395 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.81■□□□□ 0.92
MT-CO1P00395 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
MT-CO1P00395 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms