Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 F2R-202ENST00000505600 442 ntTSL 2 BASIC23.47■■□□□ 1.35
ALDH1A1P00352 LTBR-211ENST00000543190 785 ntTSL 3 BASIC23.47■■□□□ 1.35
ALDH1A1P00352 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC23.47■■□□□ 1.35
ALDH1A1P00352 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
ALDH1A1P00352 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
ALDH1A1P00352 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
ALDH1A1P00352 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
ALDH1A1P00352 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
ALDH1A1P00352 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
ALDH1A1P00352 AC116562.2-201ENST00000507042 360 ntBASIC23.46■■□□□ 1.35
ALDH1A1P00352 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC23.46■■□□□ 1.35
ALDH1A1P00352 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
ALDH1A1P00352 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC23.46■■□□□ 1.35
ALDH1A1P00352 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC23.46■■□□□ 1.35
ALDH1A1P00352 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
ALDH1A1P00352 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC23.45■■□□□ 1.34
ALDH1A1P00352 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
ALDH1A1P00352 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC23.45■■□□□ 1.34
ALDH1A1P00352 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
ALDH1A1P00352 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC23.45■■□□□ 1.34
ALDH1A1P00352 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC23.45■■□□□ 1.34
ALDH1A1P00352 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC23.45■■□□□ 1.34
ALDH1A1P00352 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC23.45■■□□□ 1.34
ALDH1A1P00352 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
ALDH1A1P00352 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC23.45■■□□□ 1.34
ALDH1A1P00352 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC23.44■■□□□ 1.34
ALDH1A1P00352 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
ALDH1A1P00352 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
ALDH1A1P00352 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
ALDH1A1P00352 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC23.44■■□□□ 1.34
ALDH1A1P00352 AL121906.2-201ENST00000621597 723 ntBASIC23.44■■□□□ 1.34
ALDH1A1P00352 CLN6-221ENST00000637494 765 ntTSL 5 BASIC23.44■■□□□ 1.34
ALDH1A1P00352 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC23.44■■□□□ 1.34
ALDH1A1P00352 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
ALDH1A1P00352 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC23.44■■□□□ 1.34
ALDH1A1P00352 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.44■■□□□ 1.34
ALDH1A1P00352 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC23.44■■□□□ 1.34
ALDH1A1P00352 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
ALDH1A1P00352 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.43■■□□□ 1.34
ALDH1A1P00352 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
ALDH1A1P00352 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
ALDH1A1P00352 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
ALDH1A1P00352 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC23.43■■□□□ 1.34
ALDH1A1P00352 AL390955.1-201ENST00000428694 934 ntBASIC23.43■■□□□ 1.34
ALDH1A1P00352 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC23.43■■□□□ 1.34
ALDH1A1P00352 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC23.43■■□□□ 1.34
ALDH1A1P00352 AC023632.3-201ENST00000521633 145 ntBASIC23.43■■□□□ 1.34
ALDH1A1P00352 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC23.43■■□□□ 1.34
ALDH1A1P00352 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
ALDH1A1P00352 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC23.43■■□□□ 1.34
ALDH1A1P00352 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
ALDH1A1P00352 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
ALDH1A1P00352 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
ALDH1A1P00352 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
ALDH1A1P00352 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC23.42■■□□□ 1.34
ALDH1A1P00352 LIN28AP1-201ENST00000429574 405 ntBASIC23.42■■□□□ 1.34
ALDH1A1P00352 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC23.42■■□□□ 1.34
ALDH1A1P00352 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC23.42■■□□□ 1.34
ALDH1A1P00352 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC23.42■■□□□ 1.34
ALDH1A1P00352 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC23.42■■□□□ 1.34
ALDH1A1P00352 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
ALDH1A1P00352 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
ALDH1A1P00352 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
ALDH1A1P00352 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC23.42■■□□□ 1.34
ALDH1A1P00352 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
ALDH1A1P00352 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC23.42■■□□□ 1.34
ALDH1A1P00352 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
ALDH1A1P00352 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
ALDH1A1P00352 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
ALDH1A1P00352 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC23.41■■□□□ 1.34
ALDH1A1P00352 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
ALDH1A1P00352 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
ALDH1A1P00352 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC23.41■■□□□ 1.34
ALDH1A1P00352 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC23.41■■□□□ 1.34
ALDH1A1P00352 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC23.41■■□□□ 1.34
ALDH1A1P00352 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC23.41■■□□□ 1.34
ALDH1A1P00352 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
ALDH1A1P00352 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC23.41■■□□□ 1.34
ALDH1A1P00352 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC23.41■■□□□ 1.34
ALDH1A1P00352 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC23.41■■□□□ 1.34
ALDH1A1P00352 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
ALDH1A1P00352 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
ALDH1A1P00352 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
ALDH1A1P00352 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
ALDH1A1P00352 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
ALDH1A1P00352 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
ALDH1A1P00352 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
ALDH1A1P00352 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
ALDH1A1P00352 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
ALDH1A1P00352 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC23.4■■□□□ 1.34
ALDH1A1P00352 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC23.4■■□□□ 1.34
ALDH1A1P00352 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC23.4■■□□□ 1.34
ALDH1A1P00352 KSR1P1-201ENST00000446298 240 ntBASIC23.4■■□□□ 1.34
ALDH1A1P00352 WWOX-216ENST00000569818 525 ntBASIC23.4■■□□□ 1.34
ALDH1A1P00352 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC23.4■■□□□ 1.34
ALDH1A1P00352 AC091076.1-201ENST00000610741 619 ntBASIC23.4■■□□□ 1.34
ALDH1A1P00352 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC23.4■■□□□ 1.34
ALDH1A1P00352 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
ALDH1A1P00352 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
ALDH1A1P00352 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms