Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLPTM1O96005 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.15■□□□□ 0.66
CLPTM1O96005 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.14■□□□□ 0.66
CLPTM1O96005 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLPTM1O96005 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLPTM1O96005 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLPTM1O96005 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.14■□□□□ 0.65
CLPTM1O96005 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLPTM1O96005 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CLPTM1O96005 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.14■□□□□ 0.65
CLPTM1O96005 pRNA.6-201ENST00000610482 90 ntBASIC19.14■□□□□ 0.65
CLPTM1O96005 pRNA.5-201ENST00000612139 90 ntBASIC19.14■□□□□ 0.65
CLPTM1O96005 pRNA.11-201ENST00000618423 90 ntBASIC19.14■□□□□ 0.65
CLPTM1O96005 pRNA.13-201ENST00000619112 90 ntBASIC19.14■□□□□ 0.65
CLPTM1O96005 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.14■□□□□ 0.65
CLPTM1O96005 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLPTM1O96005 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLPTM1O96005 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLPTM1O96005 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CLPTM1O96005 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLPTM1O96005 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.14■□□□□ 0.65
CLPTM1O96005 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.14■□□□□ 0.65
CLPTM1O96005 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.14■□□□□ 0.65
CLPTM1O96005 AL158211.5-201ENST00000623583 2518 ntBASIC19.14■□□□□ 0.65
CLPTM1O96005 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.14■□□□□ 0.65
CLPTM1O96005 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLPTM1O96005 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLPTM1O96005 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.13■□□□□ 0.65
CLPTM1O96005 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLPTM1O96005 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.13■□□□□ 0.65
CLPTM1O96005 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLPTM1O96005 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLPTM1O96005 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.13■□□□□ 0.65
CLPTM1O96005 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CLPTM1O96005 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CLPTM1O96005 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.13■□□□□ 0.65
CLPTM1O96005 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CLPTM1O96005 MIR3181-201ENST00000578512 73 ntBASIC19.13■□□□□ 0.65
CLPTM1O96005 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLPTM1O96005 AC135279.3-201ENST00000610945 1311 ntBASIC19.13■□□□□ 0.65
CLPTM1O96005 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLPTM1O96005 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLPTM1O96005 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.13■□□□□ 0.65
CLPTM1O96005 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLPTM1O96005 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLPTM1O96005 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.13■□□□□ 0.65
CLPTM1O96005 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.13■□□□□ 0.65
CLPTM1O96005 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLPTM1O96005 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLPTM1O96005 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CLPTM1O96005 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLPTM1O96005 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.12■□□□□ 0.65
CLPTM1O96005 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.12■□□□□ 0.65
CLPTM1O96005 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLPTM1O96005 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.12■□□□□ 0.65
CLPTM1O96005 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLPTM1O96005 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLPTM1O96005 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.12■□□□□ 0.65
CLPTM1O96005 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLPTM1O96005 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLPTM1O96005 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
CLPTM1O96005 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLPTM1O96005 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.12■□□□□ 0.65
CLPTM1O96005 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLPTM1O96005 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.12■□□□□ 0.65
CLPTM1O96005 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.12■□□□□ 0.65
CLPTM1O96005 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLPTM1O96005 AC106739.1-201ENST00000617035 715 ntBASIC19.12■□□□□ 0.65
CLPTM1O96005 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.12■□□□□ 0.65
CLPTM1O96005 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLPTM1O96005 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.12■□□□□ 0.65
CLPTM1O96005 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.12■□□□□ 0.65
CLPTM1O96005 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLPTM1O96005 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLPTM1O96005 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.11■□□□□ 0.65
CLPTM1O96005 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
CLPTM1O96005 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.11■□□□□ 0.65
CLPTM1O96005 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.11■□□□□ 0.65
CLPTM1O96005 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLPTM1O96005 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.11■□□□□ 0.65
CLPTM1O96005 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
CLPTM1O96005 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLPTM1O96005 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.11■□□□□ 0.65
CLPTM1O96005 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLPTM1O96005 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.11■□□□□ 0.65
CLPTM1O96005 TCF3P1-201ENST00000423021 1937 ntBASIC19.11■□□□□ 0.65
CLPTM1O96005 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLPTM1O96005 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CLPTM1O96005 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.11■□□□□ 0.65
CLPTM1O96005 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.11■□□□□ 0.65
CLPTM1O96005 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.1■□□□□ 0.65
CLPTM1O96005 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
CLPTM1O96005 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLPTM1O96005 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.1■□□□□ 0.65
CLPTM1O96005 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CLPTM1O96005 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.1■□□□□ 0.65
CLPTM1O96005 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.1■□□□□ 0.65
CLPTM1O96005 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.1■□□□□ 0.65
CLPTM1O96005 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLPTM1O96005 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms