Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CPNE3O75131 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CPNE3O75131 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CPNE3O75131 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CPNE3O75131 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.52■□□□□ 0.71
CPNE3O75131 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.51■□□□□ 0.71
CPNE3O75131 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
CPNE3O75131 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPNE3O75131 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPNE3O75131 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPNE3O75131 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CPNE3O75131 PRORSD1P-201ENST00000295112 541 ntBASIC19.51■□□□□ 0.71
CPNE3O75131 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CPNE3O75131 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.51■□□□□ 0.71
CPNE3O75131 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.51■□□□□ 0.71
CPNE3O75131 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CPNE3O75131 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.51■□□□□ 0.71
CPNE3O75131 AC060766.5-201ENST00000590539 871 ntBASIC19.51■□□□□ 0.71
CPNE3O75131 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.51■□□□□ 0.71
CPNE3O75131 HLA-B-256ENST00000639848 1089 ntBASIC19.51■□□□□ 0.71
CPNE3O75131 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPNE3O75131 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPNE3O75131 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPNE3O75131 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.51■□□□□ 0.71
CPNE3O75131 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.51■□□□□ 0.71
CPNE3O75131 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CPNE3O75131 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CPNE3O75131 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPNE3O75131 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.51■□□□□ 0.71
CPNE3O75131 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPNE3O75131 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPNE3O75131 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CPNE3O75131 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.5■□□□□ 0.71
CPNE3O75131 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPNE3O75131 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.5■□□□□ 0.71
CPNE3O75131 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPNE3O75131 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPNE3O75131 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.5■□□□□ 0.71
CPNE3O75131 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CPNE3O75131 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.5■□□□□ 0.71
CPNE3O75131 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CPNE3O75131 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.5■□□□□ 0.71
CPNE3O75131 AC026366.1-201ENST00000488803 879 ntBASIC19.5■□□□□ 0.71
CPNE3O75131 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CPNE3O75131 AP003097.1-201ENST00000530657 1135 ntBASIC19.5■□□□□ 0.71
CPNE3O75131 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.5■□□□□ 0.71
CPNE3O75131 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CPNE3O75131 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.5■□□□□ 0.71
CPNE3O75131 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.5■□□□□ 0.71
CPNE3O75131 AC006058.3-201ENST00000606217 1069 ntBASIC19.5■□□□□ 0.71
CPNE3O75131 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPNE3O75131 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
CPNE3O75131 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPNE3O75131 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPNE3O75131 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPNE3O75131 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.5■□□□□ 0.71
CPNE3O75131 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPNE3O75131 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.5■□□□□ 0.71
CPNE3O75131 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CPNE3O75131 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
CPNE3O75131 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.49■□□□□ 0.71
CPNE3O75131 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPNE3O75131 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPNE3O75131 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPNE3O75131 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPNE3O75131 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.49■□□□□ 0.71
CPNE3O75131 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CPNE3O75131 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CPNE3O75131 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPNE3O75131 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CPNE3O75131 AC105020.6-201ENST00000621523 1217 ntBASIC19.49■□□□□ 0.71
CPNE3O75131 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CPNE3O75131 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CPNE3O75131 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPNE3O75131 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPNE3O75131 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.49■□□□□ 0.71
CPNE3O75131 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPNE3O75131 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPNE3O75131 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPNE3O75131 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CPNE3O75131 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.48■□□□□ 0.71
CPNE3O75131 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPNE3O75131 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.48■□□□□ 0.71
CPNE3O75131 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.48■□□□□ 0.71
CPNE3O75131 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.48■□□□□ 0.71
CPNE3O75131 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.48■□□□□ 0.71
CPNE3O75131 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPNE3O75131 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CPNE3O75131 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPNE3O75131 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.48■□□□□ 0.71
CPNE3O75131 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.48■□□□□ 0.71
CPNE3O75131 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPNE3O75131 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CPNE3O75131 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.48■□□□□ 0.71
CPNE3O75131 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CPNE3O75131 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CPNE3O75131 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CPNE3O75131 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CPNE3O75131 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CPNE3O75131 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms