Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.64■□□□□ 0.73
PRAMEF4O60810 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.64■□□□□ 0.73
PRAMEF4O60810 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.64■□□□□ 0.73
PRAMEF4O60810 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.64■□□□□ 0.73
PRAMEF4O60810 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRAMEF4O60810 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.64■□□□□ 0.73
PRAMEF4O60810 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
PRAMEF4O60810 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRAMEF4O60810 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRAMEF4O60810 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRAMEF4O60810 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.63■□□□□ 0.73
PRAMEF4O60810 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.63■□□□□ 0.73
PRAMEF4O60810 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.63■□□□□ 0.73
PRAMEF4O60810 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.63■□□□□ 0.73
PRAMEF4O60810 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRAMEF4O60810 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.63■□□□□ 0.73
PRAMEF4O60810 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PRAMEF4O60810 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PRAMEF4O60810 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.63■□□□□ 0.73
PRAMEF4O60810 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.63■□□□□ 0.73
PRAMEF4O60810 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.63■□□□□ 0.73
PRAMEF4O60810 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRAMEF4O60810 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRAMEF4O60810 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PRAMEF4O60810 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
PRAMEF4O60810 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.62■□□□□ 0.73
PRAMEF4O60810 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRAMEF4O60810 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.62■□□□□ 0.73
PRAMEF4O60810 AC112907.3-201ENST00000577781 2400 ntBASIC19.62■□□□□ 0.73
PRAMEF4O60810 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PRAMEF4O60810 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PRAMEF4O60810 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRAMEF4O60810 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PRAMEF4O60810 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PRAMEF4O60810 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PRAMEF4O60810 CYP2T1P-201ENST00000432607 1285 ntBASIC19.62■□□□□ 0.73
PRAMEF4O60810 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.62■□□□□ 0.73
PRAMEF4O60810 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.62■□□□□ 0.73
PRAMEF4O60810 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.62■□□□□ 0.73
PRAMEF4O60810 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PRAMEF4O60810 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRAMEF4O60810 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRAMEF4O60810 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRAMEF4O60810 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PRAMEF4O60810 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRAMEF4O60810 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRAMEF4O60810 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRAMEF4O60810 SMG8-203ENST00000578922 2178 ntBASIC19.61■□□□□ 0.73
PRAMEF4O60810 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PRAMEF4O60810 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.61■□□□□ 0.73
PRAMEF4O60810 AC087633.2-202ENST00000565166 1439 ntBASIC19.61■□□□□ 0.73
PRAMEF4O60810 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.61■□□□□ 0.73
PRAMEF4O60810 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.61■□□□□ 0.73
PRAMEF4O60810 AC099778.1-201ENST00000568593 1911 ntBASIC19.61■□□□□ 0.73
PRAMEF4O60810 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.61■□□□□ 0.73
PRAMEF4O60810 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.61■□□□□ 0.73
PRAMEF4O60810 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRAMEF4O60810 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.61■□□□□ 0.73
PRAMEF4O60810 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRAMEF4O60810 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRAMEF4O60810 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PRAMEF4O60810 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
PRAMEF4O60810 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.61■□□□□ 0.73
PRAMEF4O60810 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PRAMEF4O60810 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.61■□□□□ 0.73
PRAMEF4O60810 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PRAMEF4O60810 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PRAMEF4O60810 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PRAMEF4O60810 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRAMEF4O60810 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PRAMEF4O60810 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.61■□□□□ 0.73
PRAMEF4O60810 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRAMEF4O60810 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRAMEF4O60810 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PRAMEF4O60810 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.6■□□□□ 0.73
PRAMEF4O60810 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRAMEF4O60810 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRAMEF4O60810 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.6■□□□□ 0.73
PRAMEF4O60810 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRAMEF4O60810 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.6■□□□□ 0.73
PRAMEF4O60810 CDCA4P2-201ENST00000441182 718 ntBASIC19.6■□□□□ 0.73
PRAMEF4O60810 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.6■□□□□ 0.73
PRAMEF4O60810 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.6■□□□□ 0.73
PRAMEF4O60810 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.6■□□□□ 0.73
PRAMEF4O60810 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.6■□□□□ 0.73
PRAMEF4O60810 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.6■□□□□ 0.73
PRAMEF4O60810 AC080038.1-201ENST00000611274 1154 ntBASIC19.6■□□□□ 0.73
PRAMEF4O60810 AC231657.2-201ENST00000624556 255 ntBASIC19.6■□□□□ 0.73
PRAMEF4O60810 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PRAMEF4O60810 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.6■□□□□ 0.73
PRAMEF4O60810 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
PRAMEF4O60810 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRAMEF4O60810 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.6■□□□□ 0.73
PRAMEF4O60810 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PRAMEF4O60810 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.6■□□□□ 0.73
PRAMEF4O60810 PCDHAC2-203ENST00000615316 3011 ntBASIC19.6■□□□□ 0.73
PRAMEF4O60810 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRAMEF4O60810 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.73
PRAMEF4O60810 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRAMEF4O60810 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms