Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 AC105020.6-201ENST00000621523 1217 ntBASIC20.81■□□□□ 0.92
SYNCRIPO60506 AC073648.6-201ENST00000641589 218 ntBASIC20.81■□□□□ 0.92
SYNCRIPO60506 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYNCRIPO60506 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYNCRIPO60506 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SYNCRIPO60506 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SYNCRIPO60506 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SYNCRIPO60506 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SYNCRIPO60506 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SYNCRIPO60506 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SYNCRIPO60506 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SYNCRIPO60506 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SYNCRIPO60506 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SYNCRIPO60506 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SYNCRIPO60506 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SYNCRIPO60506 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SYNCRIPO60506 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SYNCRIPO60506 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SYNCRIPO60506 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.8■□□□□ 0.92
SYNCRIPO60506 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.8■□□□□ 0.92
SYNCRIPO60506 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.8■□□□□ 0.92
SYNCRIPO60506 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.8■□□□□ 0.92
SYNCRIPO60506 PNMA6B-201ENST00000538162 1200 ntBASIC20.8■□□□□ 0.92
SYNCRIPO60506 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SYNCRIPO60506 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
SYNCRIPO60506 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SYNCRIPO60506 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SYNCRIPO60506 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SYNCRIPO60506 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SYNCRIPO60506 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNCRIPO60506 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.79■□□□□ 0.92
SYNCRIPO60506 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNCRIPO60506 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.79■□□□□ 0.92
SYNCRIPO60506 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNCRIPO60506 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNCRIPO60506 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SYNCRIPO60506 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNCRIPO60506 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.79■□□□□ 0.92
SYNCRIPO60506 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SYNCRIPO60506 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNCRIPO60506 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNCRIPO60506 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNCRIPO60506 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNCRIPO60506 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.79■□□□□ 0.92
SYNCRIPO60506 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.79■□□□□ 0.92
SYNCRIPO60506 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
SYNCRIPO60506 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.79■□□□□ 0.92
SYNCRIPO60506 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SYNCRIPO60506 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYNCRIPO60506 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYNCRIPO60506 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYNCRIPO60506 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SYNCRIPO60506 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.78■□□□□ 0.92
SYNCRIPO60506 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYNCRIPO60506 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.78■□□□□ 0.92
SYNCRIPO60506 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SYNCRIPO60506 PGM5P4-201ENST00000421970 445 ntBASIC20.78■□□□□ 0.92
SYNCRIPO60506 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
SYNCRIPO60506 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SYNCRIPO60506 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.78■□□□□ 0.92
SYNCRIPO60506 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.78■□□□□ 0.92
SYNCRIPO60506 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYNCRIPO60506 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SYNCRIPO60506 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.78■□□□□ 0.92
SYNCRIPO60506 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYNCRIPO60506 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.78■□□□□ 0.92
SYNCRIPO60506 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYNCRIPO60506 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.77■□□□□ 0.92
SYNCRIPO60506 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYNCRIPO60506 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYNCRIPO60506 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
SYNCRIPO60506 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SYNCRIPO60506 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SYNCRIPO60506 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYNCRIPO60506 UNC93B4-201ENST00000505679 747 ntBASIC20.77■□□□□ 0.92
SYNCRIPO60506 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SYNCRIPO60506 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SYNCRIPO60506 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SYNCRIPO60506 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SYNCRIPO60506 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.77■□□□□ 0.92
SYNCRIPO60506 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SYNCRIPO60506 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.77■□□□□ 0.91
SYNCRIPO60506 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SYNCRIPO60506 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.91
SYNCRIPO60506 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.77■□□□□ 0.91
SYNCRIPO60506 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
SYNCRIPO60506 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.77■□□□□ 0.91
SYNCRIPO60506 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYNCRIPO60506 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.76■□□□□ 0.91
SYNCRIPO60506 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYNCRIPO60506 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SYNCRIPO60506 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SYNCRIPO60506 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.76■□□□□ 0.91
SYNCRIPO60506 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.76■□□□□ 0.91
SYNCRIPO60506 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.76■□□□□ 0.91
SYNCRIPO60506 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYNCRIPO60506 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.76■□□□□ 0.91
SYNCRIPO60506 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYNCRIPO60506 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYNCRIPO60506 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms