Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
PRICKLE3O43900 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PRICKLE3O43900 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
PRICKLE3O43900 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.58■□□□□ 0.72
PRICKLE3O43900 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.58■□□□□ 0.72
PRICKLE3O43900 AC097658.1-201ENST00000475555 843 ntBASIC19.58■□□□□ 0.72
PRICKLE3O43900 C2orf69P4-201ENST00000565394 541 ntBASIC19.58■□□□□ 0.72
PRICKLE3O43900 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.58■□□□□ 0.72
PRICKLE3O43900 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.58■□□□□ 0.72
PRICKLE3O43900 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
PRICKLE3O43900 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRICKLE3O43900 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRICKLE3O43900 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRICKLE3O43900 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRICKLE3O43900 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRICKLE3O43900 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PRICKLE3O43900 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRICKLE3O43900 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PRICKLE3O43900 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.57■□□□□ 0.72
PRICKLE3O43900 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.57■□□□□ 0.72
PRICKLE3O43900 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.57■□□□□ 0.72
PRICKLE3O43900 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.57■□□□□ 0.72
PRICKLE3O43900 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.57■□□□□ 0.72
PRICKLE3O43900 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRICKLE3O43900 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.57■□□□□ 0.72
PRICKLE3O43900 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRICKLE3O43900 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PRICKLE3O43900 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PRICKLE3O43900 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRICKLE3O43900 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PRICKLE3O43900 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRICKLE3O43900 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRICKLE3O43900 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRICKLE3O43900 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRICKLE3O43900 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRICKLE3O43900 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRICKLE3O43900 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRICKLE3O43900 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRICKLE3O43900 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PRICKLE3O43900 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.56■□□□□ 0.72
PRICKLE3O43900 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
PRICKLE3O43900 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRICKLE3O43900 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.56■□□□□ 0.72
PRICKLE3O43900 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRICKLE3O43900 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRICKLE3O43900 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRICKLE3O43900 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRICKLE3O43900 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRICKLE3O43900 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.55■□□□□ 0.72
PRICKLE3O43900 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRICKLE3O43900 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRICKLE3O43900 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRICKLE3O43900 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PRICKLE3O43900 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRICKLE3O43900 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRICKLE3O43900 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.55■□□□□ 0.72
PRICKLE3O43900 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PRICKLE3O43900 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.55■□□□□ 0.72
PRICKLE3O43900 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PRICKLE3O43900 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.55■□□□□ 0.72
PRICKLE3O43900 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PRICKLE3O43900 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.55■□□□□ 0.72
PRICKLE3O43900 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PRICKLE3O43900 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRICKLE3O43900 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PRICKLE3O43900 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
PRICKLE3O43900 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRICKLE3O43900 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRICKLE3O43900 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.54■□□□□ 0.72
PRICKLE3O43900 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRICKLE3O43900 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRICKLE3O43900 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRICKLE3O43900 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.54■□□□□ 0.72
PRICKLE3O43900 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRICKLE3O43900 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRICKLE3O43900 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.54■□□□□ 0.72
PRICKLE3O43900 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.54■□□□□ 0.72
PRICKLE3O43900 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.54■□□□□ 0.72
PRICKLE3O43900 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PRICKLE3O43900 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PRICKLE3O43900 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.54■□□□□ 0.72
PRICKLE3O43900 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRICKLE3O43900 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRICKLE3O43900 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.53■□□□□ 0.72
PRICKLE3O43900 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
PRICKLE3O43900 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRICKLE3O43900 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.53■□□□□ 0.72
PRICKLE3O43900 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.53■□□□□ 0.72
PRICKLE3O43900 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PRICKLE3O43900 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.53■□□□□ 0.72
PRICKLE3O43900 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.53■□□□□ 0.72
PRICKLE3O43900 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
PRICKLE3O43900 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRICKLE3O43900 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PRICKLE3O43900 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
PRICKLE3O43900 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRICKLE3O43900 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.53■□□□□ 0.72
PRICKLE3O43900 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRICKLE3O43900 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRICKLE3O43900 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms