Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IDH3BO43837 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
IDH3BO43837 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IDH3BO43837 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.62■□□□□ 0.57
IDH3BO43837 AC011484.1-201ENST00000377652 1995 ntBASIC18.62■□□□□ 0.57
IDH3BO43837 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
IDH3BO43837 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
IDH3BO43837 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
IDH3BO43837 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
IDH3BO43837 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.61■□□□□ 0.57
IDH3BO43837 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IDH3BO43837 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
IDH3BO43837 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IDH3BO43837 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IDH3BO43837 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
IDH3BO43837 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.61■□□□□ 0.57
IDH3BO43837 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IDH3BO43837 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IDH3BO43837 SUDS3P1-201ENST00000505831 966 ntBASIC18.61■□□□□ 0.57
IDH3BO43837 AC008175.2-201ENST00000612840 297 ntBASIC18.61■□□□□ 0.57
IDH3BO43837 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IDH3BO43837 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.61■□□□□ 0.57
IDH3BO43837 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IDH3BO43837 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IDH3BO43837 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
IDH3BO43837 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.6■□□□□ 0.57
IDH3BO43837 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
IDH3BO43837 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
IDH3BO43837 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
IDH3BO43837 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
IDH3BO43837 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
IDH3BO43837 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
IDH3BO43837 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
IDH3BO43837 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.6■□□□□ 0.57
IDH3BO43837 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.6■□□□□ 0.57
IDH3BO43837 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
IDH3BO43837 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
IDH3BO43837 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IDH3BO43837 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.6■□□□□ 0.57
IDH3BO43837 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.6■□□□□ 0.57
IDH3BO43837 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
IDH3BO43837 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IDH3BO43837 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
IDH3BO43837 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.6■□□□□ 0.57
IDH3BO43837 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
IDH3BO43837 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
IDH3BO43837 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
IDH3BO43837 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
IDH3BO43837 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
IDH3BO43837 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
IDH3BO43837 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
IDH3BO43837 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
IDH3BO43837 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
IDH3BO43837 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
IDH3BO43837 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.59■□□□□ 0.57
IDH3BO43837 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.59■□□□□ 0.57
IDH3BO43837 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
IDH3BO43837 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.59■□□□□ 0.57
IDH3BO43837 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.59■□□□□ 0.57
IDH3BO43837 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
IDH3BO43837 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
IDH3BO43837 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
IDH3BO43837 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
IDH3BO43837 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
IDH3BO43837 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
IDH3BO43837 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.58■□□□□ 0.57
IDH3BO43837 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
IDH3BO43837 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
IDH3BO43837 AC073314.1-201ENST00000568729 2216 ntBASIC18.58■□□□□ 0.57
IDH3BO43837 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.58■□□□□ 0.57
IDH3BO43837 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.58■□□□□ 0.57
IDH3BO43837 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.58■□□□□ 0.56
IDH3BO43837 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
IDH3BO43837 AC061975.6-201ENST00000579045 1553 ntBASIC18.58■□□□□ 0.56
IDH3BO43837 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
IDH3BO43837 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.58■□□□□ 0.56
IDH3BO43837 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
IDH3BO43837 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.58■□□□□ 0.56
IDH3BO43837 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
IDH3BO43837 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.57■□□□□ 0.56
IDH3BO43837 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.57■□□□□ 0.56
IDH3BO43837 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IDH3BO43837 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IDH3BO43837 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.57■□□□□ 0.56
IDH3BO43837 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
IDH3BO43837 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
IDH3BO43837 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IDH3BO43837 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
IDH3BO43837 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IDH3BO43837 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IDH3BO43837 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.57■□□□□ 0.56
IDH3BO43837 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
IDH3BO43837 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.57■□□□□ 0.56
IDH3BO43837 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
IDH3BO43837 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
IDH3BO43837 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
IDH3BO43837 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
IDH3BO43837 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IDH3BO43837 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
IDH3BO43837 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms