Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CASQ2O14958 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CASQ2O14958 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CASQ2O14958 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CASQ2O14958 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CASQ2O14958 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CASQ2O14958 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CASQ2O14958 AC137630.3-201ENST00000607245 391 ntBASIC19.34■□□□□ 0.69
CASQ2O14958 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.34■□□□□ 0.69
CASQ2O14958 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CASQ2O14958 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.34■□□□□ 0.69
CASQ2O14958 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CASQ2O14958 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.34■□□□□ 0.69
CASQ2O14958 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CASQ2O14958 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CASQ2O14958 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CASQ2O14958 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CASQ2O14958 NEFHP1-201ENST00000412845 2629 ntBASIC19.34■□□□□ 0.69
CASQ2O14958 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CASQ2O14958 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CASQ2O14958 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.34■□□□□ 0.69
CASQ2O14958 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CASQ2O14958 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CASQ2O14958 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CASQ2O14958 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CASQ2O14958 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
CASQ2O14958 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.33■□□□□ 0.69
CASQ2O14958 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.33■□□□□ 0.69
CASQ2O14958 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.33■□□□□ 0.68
CASQ2O14958 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CASQ2O14958 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.33■□□□□ 0.68
CASQ2O14958 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.33■□□□□ 0.68
CASQ2O14958 AL451085.2-201ENST00000605085 799 ntBASIC19.33■□□□□ 0.68
CASQ2O14958 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CASQ2O14958 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CASQ2O14958 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CASQ2O14958 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CASQ2O14958 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CASQ2O14958 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CASQ2O14958 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.33■□□□□ 0.68
CASQ2O14958 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CASQ2O14958 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CASQ2O14958 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CASQ2O14958 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.33■□□□□ 0.68
CASQ2O14958 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CASQ2O14958 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
CASQ2O14958 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CASQ2O14958 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.32■□□□□ 0.68
CASQ2O14958 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASQ2O14958 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.32■□□□□ 0.68
CASQ2O14958 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CASQ2O14958 AC133637.1-201ENST00000624115 1537 ntBASIC19.32■□□□□ 0.68
CASQ2O14958 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CASQ2O14958 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASQ2O14958 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.32■□□□□ 0.68
CASQ2O14958 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASQ2O14958 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.32■□□□□ 0.68
CASQ2O14958 AC074183.2-201ENST00000623112 922 ntBASIC19.32■□□□□ 0.68
CASQ2O14958 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.32■□□□□ 0.68
CASQ2O14958 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASQ2O14958 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASQ2O14958 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASQ2O14958 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASQ2O14958 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.32■□□□□ 0.68
CASQ2O14958 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CASQ2O14958 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
CASQ2O14958 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CASQ2O14958 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.31■□□□□ 0.68
CASQ2O14958 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.31■□□□□ 0.68
CASQ2O14958 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CASQ2O14958 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CASQ2O14958 AC093503.3-201ENST00000624917 2352 ntBASIC19.31■□□□□ 0.68
CASQ2O14958 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.31■□□□□ 0.68
CASQ2O14958 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.31■□□□□ 0.68
CASQ2O14958 AC010141.3-201ENST00000456659 717 ntBASIC19.31■□□□□ 0.68
CASQ2O14958 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CASQ2O14958 MIR4449-201ENST00000578365 66 ntBASIC19.31■□□□□ 0.68
CASQ2O14958 AC087239.1-201ENST00000622671 572 ntBASIC19.31■□□□□ 0.68
CASQ2O14958 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CASQ2O14958 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CASQ2O14958 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CASQ2O14958 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CASQ2O14958 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CASQ2O14958 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CASQ2O14958 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CASQ2O14958 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CASQ2O14958 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.31■□□□□ 0.68
CASQ2O14958 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CASQ2O14958 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CASQ2O14958 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CASQ2O14958 AP006587.3-201ENST00000525742 1516 ntBASIC19.3■□□□□ 0.68
CASQ2O14958 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CASQ2O14958 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASQ2O14958 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CASQ2O14958 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASQ2O14958 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CASQ2O14958 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CASQ2O14958 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.3■□□□□ 0.68
CASQ2O14958 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CASQ2O14958 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms