Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDH17O14917 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDH17O14917 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH17O14917 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH17O14917 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH17O14917 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH17O14917 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
PCDH17O14917 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH17O14917 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDH17O14917 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.41■□□□□ 0.7
PCDH17O14917 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH17O14917 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDH17O14917 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH17O14917 AC010980.2-201ENST00000587099 1412 ntBASIC19.41■□□□□ 0.7
PCDH17O14917 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PCDH17O14917 AC092667.1-201ENST00000434301 2586 ntBASIC19.4■□□□□ 0.7
PCDH17O14917 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH17O14917 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH17O14917 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH17O14917 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH17O14917 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH17O14917 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH17O14917 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PCDH17O14917 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.4■□□□□ 0.7
PCDH17O14917 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH17O14917 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH17O14917 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH17O14917 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH17O14917 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH17O14917 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PCDH17O14917 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH17O14917 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH17O14917 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH17O14917 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
PCDH17O14917 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH17O14917 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH17O14917 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PCDH17O14917 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
PCDH17O14917 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.7
PCDH17O14917 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH17O14917 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
PCDH17O14917 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH17O14917 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH17O14917 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH17O14917 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH17O14917 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDH17O14917 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
PCDH17O14917 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDH17O14917 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH17O14917 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH17O14917 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH17O14917 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.39■□□□□ 0.69
PCDH17O14917 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH17O14917 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PCDH17O14917 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDH17O14917 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PCDH17O14917 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH17O14917 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH17O14917 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH17O14917 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PCDH17O14917 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH17O14917 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH17O14917 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH17O14917 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH17O14917 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH17O14917 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH17O14917 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH17O14917 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH17O14917 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH17O14917 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.38■□□□□ 0.69
PCDH17O14917 AC007322.3-201ENST00000426526 701 ntBASIC19.38■□□□□ 0.69
PCDH17O14917 AC093787.1-201ENST00000450396 207 ntBASIC19.38■□□□□ 0.69
PCDH17O14917 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH17O14917 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.38■□□□□ 0.69
PCDH17O14917 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH17O14917 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.38■□□□□ 0.69
PCDH17O14917 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH17O14917 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH17O14917 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH17O14917 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH17O14917 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH17O14917 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH17O14917 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.37■□□□□ 0.69
PCDH17O14917 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH17O14917 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDH17O14917 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.37■□□□□ 0.69
PCDH17O14917 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PCDH17O14917 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH17O14917 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH17O14917 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDH17O14917 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDH17O14917 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDH17O14917 KRT18P6-201ENST00000555540 1265 ntBASIC19.37■□□□□ 0.69
PCDH17O14917 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.37■□□□□ 0.69
PCDH17O14917 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.37■□□□□ 0.69
PCDH17O14917 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH17O14917 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDH17O14917 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDH17O14917 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
PCDH17O14917 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms