Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COPEO14579 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
COPEO14579 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
COPEO14579 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
COPEO14579 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.33■□□□□ 0.85
COPEO14579 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.33■□□□□ 0.85
COPEO14579 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
COPEO14579 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
COPEO14579 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
COPEO14579 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
COPEO14579 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
COPEO14579 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
COPEO14579 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COPEO14579 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
COPEO14579 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
COPEO14579 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.32■□□□□ 0.84
COPEO14579 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.32■□□□□ 0.84
COPEO14579 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.32■□□□□ 0.84
COPEO14579 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
COPEO14579 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
COPEO14579 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
COPEO14579 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COPEO14579 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
COPEO14579 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COPEO14579 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COPEO14579 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.32■□□□□ 0.84
COPEO14579 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COPEO14579 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.32■□□□□ 0.84
COPEO14579 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.32■□□□□ 0.84
COPEO14579 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.32■□□□□ 0.84
COPEO14579 RARRES2P11-201ENST00000635158 484 ntBASIC20.32■□□□□ 0.84
COPEO14579 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.32■□□□□ 0.84
COPEO14579 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COPEO14579 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
COPEO14579 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COPEO14579 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.32■□□□□ 0.84
COPEO14579 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
COPEO14579 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
COPEO14579 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
COPEO14579 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COPEO14579 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COPEO14579 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.31■□□□□ 0.84
COPEO14579 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
COPEO14579 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COPEO14579 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COPEO14579 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.31■□□□□ 0.84
COPEO14579 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
COPEO14579 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
COPEO14579 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COPEO14579 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.31■□□□□ 0.84
COPEO14579 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.31■□□□□ 0.84
COPEO14579 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
COPEO14579 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.31■□□□□ 0.84
COPEO14579 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COPEO14579 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COPEO14579 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
COPEO14579 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COPEO14579 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COPEO14579 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.31■□□□□ 0.84
COPEO14579 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
COPEO14579 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
COPEO14579 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COPEO14579 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COPEO14579 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
COPEO14579 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COPEO14579 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COPEO14579 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COPEO14579 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
COPEO14579 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.3■□□□□ 0.84
COPEO14579 AC245052.3-201ENST00000450182 901 ntBASIC20.3■□□□□ 0.84
COPEO14579 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.3■□□□□ 0.84
COPEO14579 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.3■□□□□ 0.84
COPEO14579 MIR2861-201ENST00000636310 90 ntBASIC20.3■□□□□ 0.84
COPEO14579 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COPEO14579 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.3■□□□□ 0.84
COPEO14579 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.3■□□□□ 0.84
COPEO14579 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
COPEO14579 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COPEO14579 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COPEO14579 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.3■□□□□ 0.84
COPEO14579 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COPEO14579 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.3■□□□□ 0.84
COPEO14579 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
COPEO14579 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
COPEO14579 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.29■□□□□ 0.84
COPEO14579 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COPEO14579 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.29■□□□□ 0.84
COPEO14579 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COPEO14579 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
COPEO14579 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COPEO14579 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
COPEO14579 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.29■□□□□ 0.84
COPEO14579 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.29■□□□□ 0.84
COPEO14579 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COPEO14579 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COPEO14579 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.29■□□□□ 0.84
COPEO14579 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.29■□□□□ 0.84
COPEO14579 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.29■□□□□ 0.84
COPEO14579 AC116562.4-201ENST00000641316 2276 ntBASIC20.29■□□□□ 0.84
COPEO14579 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms