Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
E2F3O00716 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
E2F3O00716 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.87■□□□□ 0.77
E2F3O00716 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
E2F3O00716 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.87■□□□□ 0.77
E2F3O00716 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
E2F3O00716 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.87■□□□□ 0.77
E2F3O00716 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
E2F3O00716 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
E2F3O00716 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.86■□□□□ 0.77
E2F3O00716 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.86■□□□□ 0.77
E2F3O00716 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
E2F3O00716 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
E2F3O00716 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
E2F3O00716 AC099778.1-201ENST00000568593 1911 ntBASIC19.86■□□□□ 0.77
E2F3O00716 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.86■□□□□ 0.77
E2F3O00716 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.86■□□□□ 0.77
E2F3O00716 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
E2F3O00716 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
E2F3O00716 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
E2F3O00716 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
E2F3O00716 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
E2F3O00716 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
E2F3O00716 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
E2F3O00716 AC112907.3-201ENST00000577781 2400 ntBASIC19.86■□□□□ 0.77
E2F3O00716 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
E2F3O00716 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
E2F3O00716 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
E2F3O00716 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
E2F3O00716 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
E2F3O00716 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
E2F3O00716 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
E2F3O00716 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
E2F3O00716 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
E2F3O00716 AC007322.3-201ENST00000426526 701 ntBASIC19.85■□□□□ 0.77
E2F3O00716 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.85■□□□□ 0.77
E2F3O00716 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
E2F3O00716 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.85■□□□□ 0.77
E2F3O00716 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
E2F3O00716 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.85■□□□□ 0.77
E2F3O00716 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.85■□□□□ 0.77
E2F3O00716 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
E2F3O00716 PCDHAC2-203ENST00000615316 3011 ntBASIC19.85■□□□□ 0.77
E2F3O00716 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
E2F3O00716 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.85■□□□□ 0.77
E2F3O00716 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
E2F3O00716 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
E2F3O00716 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.84■□□□□ 0.77
E2F3O00716 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
E2F3O00716 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
E2F3O00716 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
E2F3O00716 AC026185.1-201ENST00000445748 174 ntBASIC19.84■□□□□ 0.77
E2F3O00716 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.84■□□□□ 0.77
E2F3O00716 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
E2F3O00716 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.84■□□□□ 0.77
E2F3O00716 AC104771.1-201ENST00000603335 964 ntBASIC19.84■□□□□ 0.77
E2F3O00716 BID-214ENST00000617586 542 ntTSL 5 BASIC19.84■□□□□ 0.77
E2F3O00716 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.84■□□□□ 0.77
E2F3O00716 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.84■□□□□ 0.77
E2F3O00716 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
E2F3O00716 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.84■□□□□ 0.77
E2F3O00716 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
E2F3O00716 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.84■□□□□ 0.77
E2F3O00716 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.84■□□□□ 0.77
E2F3O00716 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.84■□□□□ 0.77
E2F3O00716 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
E2F3O00716 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
E2F3O00716 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
E2F3O00716 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
E2F3O00716 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
E2F3O00716 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
E2F3O00716 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
E2F3O00716 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
E2F3O00716 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
E2F3O00716 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.83■□□□□ 0.77
E2F3O00716 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
E2F3O00716 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.83■□□□□ 0.77
E2F3O00716 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
E2F3O00716 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
E2F3O00716 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.77
E2F3O00716 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
E2F3O00716 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.83■□□□□ 0.77
E2F3O00716 MYCNOS-205ENST00000641950 531 ntBASIC19.83■□□□□ 0.77
E2F3O00716 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.83■□□□□ 0.76
E2F3O00716 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.83■□□□□ 0.76
E2F3O00716 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
E2F3O00716 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
E2F3O00716 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
E2F3O00716 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.83■□□□□ 0.76
E2F3O00716 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
E2F3O00716 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
E2F3O00716 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
E2F3O00716 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.83■□□□□ 0.76
E2F3O00716 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
E2F3O00716 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.82■□□□□ 0.76
E2F3O00716 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.82■□□□□ 0.76
E2F3O00716 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
E2F3O00716 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.82■□□□□ 0.76
E2F3O00716 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.82■□□□□ 0.76
E2F3O00716 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms