Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.81■□□□□ 0.6
TNFRSF11BO00300 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TNFRSF11BO00300 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.81■□□□□ 0.6
TNFRSF11BO00300 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFRSF11BO00300 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
TNFRSF11BO00300 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.81■□□□□ 0.6
TNFRSF11BO00300 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
TNFRSF11BO00300 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFRSF11BO00300 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
TNFRSF11BO00300 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.8■□□□□ 0.6
TNFRSF11BO00300 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TNFRSF11BO00300 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFRSF11BO00300 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFRSF11BO00300 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TNFRSF11BO00300 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.8■□□□□ 0.6
TNFRSF11BO00300 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFRSF11BO00300 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.8■□□□□ 0.6
TNFRSF11BO00300 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFRSF11BO00300 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TNFRSF11BO00300 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFRSF11BO00300 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TNFRSF11BO00300 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFRSF11BO00300 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TNFRSF11BO00300 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFRSF11BO00300 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFRSF11BO00300 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.8■□□□□ 0.6
TNFRSF11BO00300 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.8■□□□□ 0.6
TNFRSF11BO00300 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TNFRSF11BO00300 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TNFRSF11BO00300 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFRSF11BO00300 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFRSF11BO00300 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFRSF11BO00300 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFRSF11BO00300 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.79■□□□□ 0.6
TNFRSF11BO00300 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TNFRSF11BO00300 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFRSF11BO00300 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TNFRSF11BO00300 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFRSF11BO00300 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFRSF11BO00300 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.79■□□□□ 0.6
TNFRSF11BO00300 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TNFRSF11BO00300 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFRSF11BO00300 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFRSF11BO00300 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.79■□□□□ 0.6
TNFRSF11BO00300 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFRSF11BO00300 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.79■□□□□ 0.6
TNFRSF11BO00300 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.79■□□□□ 0.6
TNFRSF11BO00300 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.79■□□□□ 0.6
TNFRSF11BO00300 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.79■□□□□ 0.6
TNFRSF11BO00300 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.79■□□□□ 0.6
TNFRSF11BO00300 RARRES2P11-201ENST00000635158 484 ntBASIC18.79■□□□□ 0.6
TNFRSF11BO00300 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TNFRSF11BO00300 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFRSF11BO00300 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFRSF11BO00300 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.79■□□□□ 0.6
TNFRSF11BO00300 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFRSF11BO00300 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TNFRSF11BO00300 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.79■□□□□ 0.6
TNFRSF11BO00300 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFRSF11BO00300 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TNFRSF11BO00300 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TNFRSF11BO00300 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFRSF11BO00300 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFRSF11BO00300 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFRSF11BO00300 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TNFRSF11BO00300 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFRSF11BO00300 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
TNFRSF11BO00300 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.78■□□□□ 0.6
TNFRSF11BO00300 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFRSF11BO00300 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TNFRSF11BO00300 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFRSF11BO00300 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.78■□□□□ 0.6
TNFRSF11BO00300 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.78■□□□□ 0.6
TNFRSF11BO00300 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.78■□□□□ 0.6
TNFRSF11BO00300 AC116562.4-201ENST00000641316 2276 ntBASIC18.78■□□□□ 0.6
TNFRSF11BO00300 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TNFRSF11BO00300 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
TNFRSF11BO00300 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TNFRSF11BO00300 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TNFRSF11BO00300 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.78■□□□□ 0.6
TNFRSF11BO00300 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.78■□□□□ 0.6
TNFRSF11BO00300 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.78■□□□□ 0.6
TNFRSF11BO00300 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.78■□□□□ 0.6
TNFRSF11BO00300 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFRSF11BO00300 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFRSF11BO00300 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.78■□□□□ 0.6
TNFRSF11BO00300 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFRSF11BO00300 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.78■□□□□ 0.6
TNFRSF11BO00300 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFRSF11BO00300 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TNFRSF11BO00300 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TNFRSF11BO00300 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TNFRSF11BO00300 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TNFRSF11BO00300 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TNFRSF11BO00300 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TNFRSF11BO00300 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.77■□□□□ 0.6
TNFRSF11BO00300 AC245052.3-201ENST00000450182 901 ntBASIC18.77■□□□□ 0.6
TNFRSF11BO00300 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.77■□□□□ 0.6
TNFRSF11BO00300 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.77■□□□□ 0.6
TNFRSF11BO00300 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms