Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
CCDC189A1A4V9 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC189A1A4V9 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC189A1A4V9 AC010141.2-201ENST00000452426 721 ntBASIC20.31■□□□□ 0.84
CCDC189A1A4V9 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.31■□□□□ 0.84
CCDC189A1A4V9 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC189A1A4V9 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC189A1A4V9 AC007225.1-201ENST00000566331 1836 ntBASIC20.31■□□□□ 0.84
CCDC189A1A4V9 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CCDC189A1A4V9 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CCDC189A1A4V9 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC189A1A4V9 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC189A1A4V9 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
CCDC189A1A4V9 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC189A1A4V9 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC189A1A4V9 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC189A1A4V9 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC189A1A4V9 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC189A1A4V9 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC189A1A4V9 AC245052.3-201ENST00000450182 901 ntBASIC20.3■□□□□ 0.84
CCDC189A1A4V9 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC189A1A4V9 AC105265.2-201ENST00000467189 838 ntBASIC20.3■□□□□ 0.84
CCDC189A1A4V9 MIR6084-201ENST00000622012 110 ntBASIC20.3■□□□□ 0.84
CCDC189A1A4V9 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CCDC189A1A4V9 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC189A1A4V9 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC189A1A4V9 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC189A1A4V9 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC189A1A4V9 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC189A1A4V9 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC189A1A4V9 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC189A1A4V9 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC189A1A4V9 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CCDC189A1A4V9 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC189A1A4V9 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC189A1A4V9 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC189A1A4V9 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC189A1A4V9 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC189A1A4V9 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC189A1A4V9 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC189A1A4V9 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC189A1A4V9 KRT18P20-201ENST00000548986 1279 ntBASIC20.29■□□□□ 0.84
CCDC189A1A4V9 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC189A1A4V9 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC189A1A4V9 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
CCDC189A1A4V9 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC189A1A4V9 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC189A1A4V9 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CCDC189A1A4V9 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC189A1A4V9 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC189A1A4V9 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC189A1A4V9 AC018445.3-201ENST00000624177 1945 ntBASIC20.28■□□□□ 0.84
CCDC189A1A4V9 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC189A1A4V9 DUX4L2-201ENST00000561772 1275 ntBASIC20.28■□□□□ 0.84
CCDC189A1A4V9 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.28■□□□□ 0.84
CCDC189A1A4V9 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC189A1A4V9 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.28■□□□□ 0.84
CCDC189A1A4V9 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.28■□□□□ 0.84
CCDC189A1A4V9 DUX4L6-201ENST00000626483 1275 ntBASIC20.28■□□□□ 0.84
CCDC189A1A4V9 DUX4L1-201ENST00000627662 1275 ntBASIC20.28■□□□□ 0.84
CCDC189A1A4V9 DUX4L8-201ENST00000629013 1275 ntBASIC20.28■□□□□ 0.84
CCDC189A1A4V9 DUX4L3-201ENST00000630187 1275 ntBASIC20.28■□□□□ 0.84
CCDC189A1A4V9 DUX4L7-201ENST00000630678 1275 ntBASIC20.28■□□□□ 0.84
CCDC189A1A4V9 DUX4L5-201ENST00000630834 1275 ntBASIC20.28■□□□□ 0.84
CCDC189A1A4V9 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC189A1A4V9 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC189A1A4V9 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC189A1A4V9 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.28■□□□□ 0.84
CCDC189A1A4V9 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC189A1A4V9 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC189A1A4V9 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CCDC189A1A4V9 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC189A1A4V9 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC189A1A4V9 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.27■□□□□ 0.84
CCDC189A1A4V9 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.27■□□□□ 0.84
CCDC189A1A4V9 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.27■□□□□ 0.84
CCDC189A1A4V9 RARRES2P11-201ENST00000635158 484 ntBASIC20.27■□□□□ 0.84
CCDC189A1A4V9 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC189A1A4V9 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CCDC189A1A4V9 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
CCDC189A1A4V9 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
CCDC189A1A4V9 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC189A1A4V9 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC189A1A4V9 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC189A1A4V9 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC189A1A4V9 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC189A1A4V9 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC189A1A4V9 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC189A1A4V9 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC189A1A4V9 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC189A1A4V9 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC189A1A4V9 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC189A1A4V9 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC189A1A4V9 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC189A1A4V9 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC189A1A4V9 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC189A1A4V9 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC189A1A4V9 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CCDC189A1A4V9 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC189A1A4V9 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms