Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV4S1A1TA0A5B7 CYP2T1P-201ENST00000432607 1285 ntBASIC16.35■□□□□ 0.21
TCRBV4S1A1TA0A5B7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV4S1A1TA0A5B7 AC007322.4-201ENST00000509611 723 ntBASIC16.35■□□□□ 0.21
TCRBV4S1A1TA0A5B7 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TCRBV4S1A1TA0A5B7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.35■□□□□ 0.21
TCRBV4S1A1TA0A5B7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.35■□□□□ 0.21
TCRBV4S1A1TA0A5B7 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
TCRBV4S1A1TA0A5B7 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV4S1A1TA0A5B7 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV4S1A1TA0A5B7 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV4S1A1TA0A5B7 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV4S1A1TA0A5B7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV4S1A1TA0A5B7 AC068338.2-201ENST00000563278 1430 ntBASIC16.35■□□□□ 0.21
TCRBV4S1A1TA0A5B7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV4S1A1TA0A5B7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TCRBV4S1A1TA0A5B7 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.35■□□□□ 0.21
TCRBV4S1A1TA0A5B7 AP005212.1-201ENST00000581547 1997 ntBASIC16.35■□□□□ 0.21
TCRBV4S1A1TA0A5B7 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.34■□□□□ 0.21
TCRBV4S1A1TA0A5B7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV4S1A1TA0A5B7 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV4S1A1TA0A5B7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.34■□□□□ 0.21
TCRBV4S1A1TA0A5B7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV4S1A1TA0A5B7 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV4S1A1TA0A5B7 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
TCRBV4S1A1TA0A5B7 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
TCRBV4S1A1TA0A5B7 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV4S1A1TA0A5B7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV4S1A1TA0A5B7 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV4S1A1TA0A5B7 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV4S1A1TA0A5B7 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.34■□□□□ 0.21
TCRBV4S1A1TA0A5B7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.34■□□□□ 0.21
TCRBV4S1A1TA0A5B7 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.34■□□□□ 0.21
TCRBV4S1A1TA0A5B7 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV4S1A1TA0A5B7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.34■□□□□ 0.21
TCRBV4S1A1TA0A5B7 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.34■□□□□ 0.21
TCRBV4S1A1TA0A5B7 AL138781.1-201ENST00000566567 1274 ntBASIC16.34■□□□□ 0.21
TCRBV4S1A1TA0A5B7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
TCRBV4S1A1TA0A5B7 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.34■□□□□ 0.21
TCRBV4S1A1TA0A5B7 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV4S1A1TA0A5B7 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TCRBV4S1A1TA0A5B7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV4S1A1TA0A5B7 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV4S1A1TA0A5B7 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.34■□□□□ 0.21
TCRBV4S1A1TA0A5B7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV4S1A1TA0A5B7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV4S1A1TA0A5B7 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV4S1A1TA0A5B7 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TCRBV4S1A1TA0A5B7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV4S1A1TA0A5B7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
TCRBV4S1A1TA0A5B7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TCRBV4S1A1TA0A5B7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.33■□□□□ 0.21
TCRBV4S1A1TA0A5B7 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TCRBV4S1A1TA0A5B7 GUSBP6-202ENST00000438529 1198 ntBASIC16.33■□□□□ 0.2
TCRBV4S1A1TA0A5B7 CD99P1-205ENST00000527459 561 ntBASIC16.33■□□□□ 0.2
TCRBV4S1A1TA0A5B7 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.33■□□□□ 0.2
TCRBV4S1A1TA0A5B7 AC133041.1-202ENST00000642053 222 ntBASIC16.33■□□□□ 0.2
TCRBV4S1A1TA0A5B7 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TCRBV4S1A1TA0A5B7 AC092667.1-201ENST00000434301 2586 ntBASIC16.33■□□□□ 0.2
TCRBV4S1A1TA0A5B7 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
TCRBV4S1A1TA0A5B7 AC061975.6-201ENST00000579045 1553 ntBASIC16.33■□□□□ 0.2
TCRBV4S1A1TA0A5B7 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.33■□□□□ 0.2
TCRBV4S1A1TA0A5B7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TCRBV4S1A1TA0A5B7 AC121338.2-201ENST00000622535 1744 ntBASIC16.33■□□□□ 0.2
TCRBV4S1A1TA0A5B7 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TCRBV4S1A1TA0A5B7 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TCRBV4S1A1TA0A5B7 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TCRBV4S1A1TA0A5B7 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TCRBV4S1A1TA0A5B7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TCRBV4S1A1TA0A5B7 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TCRBV4S1A1TA0A5B7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TCRBV4S1A1TA0A5B7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.33■□□□□ 0.2
TCRBV4S1A1TA0A5B7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TCRBV4S1A1TA0A5B7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCRBV4S1A1TA0A5B7 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
TCRBV4S1A1TA0A5B7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TCRBV4S1A1TA0A5B7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCRBV4S1A1TA0A5B7 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCRBV4S1A1TA0A5B7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TCRBV4S1A1TA0A5B7 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.32■□□□□ 0.2
TCRBV4S1A1TA0A5B7 MKRN4P-201ENST00000444706 1521 ntBASIC16.32■□□□□ 0.2
TCRBV4S1A1TA0A5B7 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.32■□□□□ 0.2
TCRBV4S1A1TA0A5B7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
TCRBV4S1A1TA0A5B7 OR10C1-204ENST00000622521 1039 ntBASIC16.32■□□□□ 0.2
TCRBV4S1A1TA0A5B7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCRBV4S1A1TA0A5B7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.32■□□□□ 0.2
TCRBV4S1A1TA0A5B7 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.32■□□□□ 0.2
TCRBV4S1A1TA0A5B7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TCRBV4S1A1TA0A5B7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TCRBV4S1A1TA0A5B7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.31■□□□□ 0.2
TCRBV4S1A1TA0A5B7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
TCRBV4S1A1TA0A5B7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TCRBV4S1A1TA0A5B7 AC073314.1-201ENST00000568729 2216 ntBASIC16.31■□□□□ 0.2
TCRBV4S1A1TA0A5B7 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TCRBV4S1A1TA0A5B7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TCRBV4S1A1TA0A5B7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TCRBV4S1A1TA0A5B7 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TCRBV4S1A1TA0A5B7 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TCRBV4S1A1TA0A5B7 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TCRBV4S1A1TA0A5B7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms