Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TCRBV3S1A0A5B6 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TCRBV3S1A0A5B6 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.08■□□□□ 0.64
TCRBV3S1A0A5B6 DUX4L19-201ENST00000557448 1267 ntBASIC19.08■□□□□ 0.64
TCRBV3S1A0A5B6 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.08■□□□□ 0.64
TCRBV3S1A0A5B6 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TCRBV3S1A0A5B6 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.08■□□□□ 0.64
TCRBV3S1A0A5B6 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TCRBV3S1A0A5B6 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
TCRBV3S1A0A5B6 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.08■□□□□ 0.64
TCRBV3S1A0A5B6 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TCRBV3S1A0A5B6 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.08■□□□□ 0.64
TCRBV3S1A0A5B6 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TCRBV3S1A0A5B6 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TCRBV3S1A0A5B6 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.08■□□□□ 0.64
TCRBV3S1A0A5B6 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV3S1A0A5B6 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV3S1A0A5B6 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV3S1A0A5B6 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV3S1A0A5B6 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV3S1A0A5B6 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TCRBV3S1A0A5B6 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV3S1A0A5B6 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV3S1A0A5B6 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TCRBV3S1A0A5B6 EEF1DP3-203ENST00000566025 782 ntBASIC19.07■□□□□ 0.64
TCRBV3S1A0A5B6 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.07■□□□□ 0.64
TCRBV3S1A0A5B6 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.07■□□□□ 0.64
TCRBV3S1A0A5B6 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.07■□□□□ 0.64
TCRBV3S1A0A5B6 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV3S1A0A5B6 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV3S1A0A5B6 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV3S1A0A5B6 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV3S1A0A5B6 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.07■□□□□ 0.64
TCRBV3S1A0A5B6 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV3S1A0A5B6 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV3S1A0A5B6 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.07■□□□□ 0.64
TCRBV3S1A0A5B6 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TCRBV3S1A0A5B6 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV3S1A0A5B6 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV3S1A0A5B6 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.07■□□□□ 0.64
TCRBV3S1A0A5B6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
TCRBV3S1A0A5B6 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TCRBV3S1A0A5B6 AC093503.3-201ENST00000624917 2352 ntBASIC19.06■□□□□ 0.64
TCRBV3S1A0A5B6 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TCRBV3S1A0A5B6 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TCRBV3S1A0A5B6 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
TCRBV3S1A0A5B6 AC053503.5-201ENST00000601508 636 ntBASIC19.06■□□□□ 0.64
TCRBV3S1A0A5B6 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TCRBV3S1A0A5B6 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TCRBV3S1A0A5B6 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TCRBV3S1A0A5B6 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
TCRBV3S1A0A5B6 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TCRBV3S1A0A5B6 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV3S1A0A5B6 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV3S1A0A5B6 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.05■□□□□ 0.64
TCRBV3S1A0A5B6 Z82202.1-201ENST00000623446 1880 ntBASIC19.05■□□□□ 0.64
TCRBV3S1A0A5B6 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV3S1A0A5B6 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
TCRBV3S1A0A5B6 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV3S1A0A5B6 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.05■□□□□ 0.64
TCRBV3S1A0A5B6 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.05■□□□□ 0.64
TCRBV3S1A0A5B6 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.05■□□□□ 0.64
TCRBV3S1A0A5B6 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.05■□□□□ 0.64
TCRBV3S1A0A5B6 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.05■□□□□ 0.64
TCRBV3S1A0A5B6 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
TCRBV3S1A0A5B6 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.05■□□□□ 0.64
TCRBV3S1A0A5B6 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV3S1A0A5B6 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV3S1A0A5B6 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV3S1A0A5B6 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV3S1A0A5B6 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV3S1A0A5B6 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV3S1A0A5B6 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV3S1A0A5B6 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV3S1A0A5B6 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV3S1A0A5B6 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.04■□□□□ 0.64
TCRBV3S1A0A5B6 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.04■□□□□ 0.64
TCRBV3S1A0A5B6 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV3S1A0A5B6 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.04■□□□□ 0.64
TCRBV3S1A0A5B6 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
TCRBV3S1A0A5B6 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
TCRBV3S1A0A5B6 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV3S1A0A5B6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV3S1A0A5B6 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
TCRBV3S1A0A5B6 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV3S1A0A5B6 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV3S1A0A5B6 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.04■□□□□ 0.64
TCRBV3S1A0A5B6 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.04■□□□□ 0.64
TCRBV3S1A0A5B6 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV3S1A0A5B6 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TCRBV3S1A0A5B6 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
TCRBV3S1A0A5B6 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.04■□□□□ 0.64
TCRBV3S1A0A5B6 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV3S1A0A5B6 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TCRBV3S1A0A5B6 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV3S1A0A5B6 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.03■□□□□ 0.64
TCRBV3S1A0A5B6 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.03■□□□□ 0.64
TCRBV3S1A0A5B6 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV3S1A0A5B6 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV3S1A0A5B6 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms