Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TRDV1A0A1B0GX56 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRDV1A0A1B0GX56 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.91■□□□□ 0.46
TRDV1A0A1B0GX56 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRDV1A0A1B0GX56 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRDV1A0A1B0GX56 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TRDV1A0A1B0GX56 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRDV1A0A1B0GX56 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRDV1A0A1B0GX56 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRDV1A0A1B0GX56 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TRDV1A0A1B0GX56 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRDV1A0A1B0GX56 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRDV1A0A1B0GX56 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.9■□□□□ 0.46
TRDV1A0A1B0GX56 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRDV1A0A1B0GX56 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.9■□□□□ 0.46
TRDV1A0A1B0GX56 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRDV1A0A1B0GX56 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.9■□□□□ 0.46
TRDV1A0A1B0GX56 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.9■□□□□ 0.46
TRDV1A0A1B0GX56 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRDV1A0A1B0GX56 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
TRDV1A0A1B0GX56 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRDV1A0A1B0GX56 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRDV1A0A1B0GX56 DUX4L19-201ENST00000557448 1267 ntBASIC17.9■□□□□ 0.46
TRDV1A0A1B0GX56 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.9■□□□□ 0.46
TRDV1A0A1B0GX56 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRDV1A0A1B0GX56 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRDV1A0A1B0GX56 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.9■□□□□ 0.46
TRDV1A0A1B0GX56 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRDV1A0A1B0GX56 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TRDV1A0A1B0GX56 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.9■□□□□ 0.46
TRDV1A0A1B0GX56 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRDV1A0A1B0GX56 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.9■□□□□ 0.46
TRDV1A0A1B0GX56 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TRDV1A0A1B0GX56 AC093484.2-201ENST00000580996 2166 ntBASIC17.9■□□□□ 0.46
TRDV1A0A1B0GX56 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRDV1A0A1B0GX56 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRDV1A0A1B0GX56 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.9■□□□□ 0.46
TRDV1A0A1B0GX56 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.9■□□□□ 0.46
TRDV1A0A1B0GX56 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
TRDV1A0A1B0GX56 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRDV1A0A1B0GX56 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRDV1A0A1B0GX56 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRDV1A0A1B0GX56 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRDV1A0A1B0GX56 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TRDV1A0A1B0GX56 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
TRDV1A0A1B0GX56 MIR2861-201ENST00000636310 90 ntBASIC17.89■□□□□ 0.45
TRDV1A0A1B0GX56 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
TRDV1A0A1B0GX56 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRDV1A0A1B0GX56 AC005224.4-201ENST00000583262 1652 ntBASIC17.89■□□□□ 0.45
TRDV1A0A1B0GX56 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRDV1A0A1B0GX56 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRDV1A0A1B0GX56 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRDV1A0A1B0GX56 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRDV1A0A1B0GX56 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRDV1A0A1B0GX56 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRDV1A0A1B0GX56 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRDV1A0A1B0GX56 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
TRDV1A0A1B0GX56 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRDV1A0A1B0GX56 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRDV1A0A1B0GX56 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRDV1A0A1B0GX56 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRDV1A0A1B0GX56 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TRDV1A0A1B0GX56 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.88■□□□□ 0.45
TRDV1A0A1B0GX56 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.88■□□□□ 0.45
TRDV1A0A1B0GX56 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TRDV1A0A1B0GX56 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRDV1A0A1B0GX56 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRDV1A0A1B0GX56 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.88■□□□□ 0.45
TRDV1A0A1B0GX56 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.88■□□□□ 0.45
TRDV1A0A1B0GX56 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRDV1A0A1B0GX56 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRDV1A0A1B0GX56 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRDV1A0A1B0GX56 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRDV1A0A1B0GX56 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRDV1A0A1B0GX56 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRDV1A0A1B0GX56 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.87■□□□□ 0.45
TRDV1A0A1B0GX56 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
TRDV1A0A1B0GX56 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TRDV1A0A1B0GX56 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRDV1A0A1B0GX56 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRDV1A0A1B0GX56 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.87■□□□□ 0.45
TRDV1A0A1B0GX56 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.87■□□□□ 0.45
TRDV1A0A1B0GX56 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.87■□□□□ 0.45
TRDV1A0A1B0GX56 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.87■□□□□ 0.45
TRDV1A0A1B0GX56 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.87■□□□□ 0.45
TRDV1A0A1B0GX56 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TRDV1A0A1B0GX56 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRDV1A0A1B0GX56 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.87■□□□□ 0.45
TRDV1A0A1B0GX56 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRDV1A0A1B0GX56 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRDV1A0A1B0GX56 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.87■□□□□ 0.45
TRDV1A0A1B0GX56 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRDV1A0A1B0GX56 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRDV1A0A1B0GX56 AC061975.6-201ENST00000579045 1553 ntBASIC17.87■□□□□ 0.45
TRDV1A0A1B0GX56 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRDV1A0A1B0GX56 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRDV1A0A1B0GX56 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.86■□□□□ 0.45
TRDV1A0A1B0GX56 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TRDV1A0A1B0GX56 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRDV1A0A1B0GX56 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms