Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM238LA0A1B0GVL6 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
TMEM238LA0A1B0GVL6 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC14.26□□□□□ -0.13
TMEM238LA0A1B0GVL6 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM238LA0A1B0GVL6 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TMEM238LA0A1B0GVL6 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM238LA0A1B0GVL6 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.26□□□□□ -0.13
TMEM238LA0A1B0GVL6 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM238LA0A1B0GVL6 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC14.26□□□□□ -0.13
TMEM238LA0A1B0GVL6 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC14.26□□□□□ -0.13
TMEM238LA0A1B0GVL6 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM238LA0A1B0GVL6 AR-207ENST00000612010 3896 ntTSL 5 BASIC14.26□□□□□ -0.13
TMEM238LA0A1B0GVL6 CA15P2-201ENST00000611168 834 ntBASIC14.26□□□□□ -0.13
TMEM238LA0A1B0GVL6 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM238LA0A1B0GVL6 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TMEM238LA0A1B0GVL6 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM238LA0A1B0GVL6 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM238LA0A1B0GVL6 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM238LA0A1B0GVL6 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TMEM238LA0A1B0GVL6 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM238LA0A1B0GVL6 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC14.26□□□□□ -0.13
TMEM238LA0A1B0GVL6 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM238LA0A1B0GVL6 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM238LA0A1B0GVL6 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM238LA0A1B0GVL6 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM238LA0A1B0GVL6 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM238LA0A1B0GVL6 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.25□□□□□ -0.13
TMEM238LA0A1B0GVL6 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM238LA0A1B0GVL6 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM238LA0A1B0GVL6 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM238LA0A1B0GVL6 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM238LA0A1B0GVL6 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM238LA0A1B0GVL6 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM238LA0A1B0GVL6 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM238LA0A1B0GVL6 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM238LA0A1B0GVL6 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM238LA0A1B0GVL6 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM238LA0A1B0GVL6 HLA-V-202ENST00000446817 847 ntBASIC14.25□□□□□ -0.13
TMEM238LA0A1B0GVL6 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
TMEM238LA0A1B0GVL6 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC14.25□□□□□ -0.13
TMEM238LA0A1B0GVL6 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
TMEM238LA0A1B0GVL6 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM238LA0A1B0GVL6 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM238LA0A1B0GVL6 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM238LA0A1B0GVL6 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
TMEM238LA0A1B0GVL6 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TMEM238LA0A1B0GVL6 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TMEM238LA0A1B0GVL6 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.25□□□□□ -0.13
TMEM238LA0A1B0GVL6 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM238LA0A1B0GVL6 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM238LA0A1B0GVL6 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TMEM238LA0A1B0GVL6 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM238LA0A1B0GVL6 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TMEM238LA0A1B0GVL6 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC14.24□□□□□ -0.13
TMEM238LA0A1B0GVL6 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM238LA0A1B0GVL6 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM238LA0A1B0GVL6 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM238LA0A1B0GVL6 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM238LA0A1B0GVL6 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.24□□□□□ -0.13
TMEM238LA0A1B0GVL6 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TMEM238LA0A1B0GVL6 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM238LA0A1B0GVL6 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TMEM238LA0A1B0GVL6 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TMEM238LA0A1B0GVL6 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC14.24□□□□□ -0.13
TMEM238LA0A1B0GVL6 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM238LA0A1B0GVL6 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TMEM238LA0A1B0GVL6 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM238LA0A1B0GVL6 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.24□□□□□ -0.13
TMEM238LA0A1B0GVL6 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM238LA0A1B0GVL6 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC14.24□□□□□ -0.13
TMEM238LA0A1B0GVL6 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM238LA0A1B0GVL6 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
TMEM238LA0A1B0GVL6 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM238LA0A1B0GVL6 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC14.24□□□□□ -0.13
TMEM238LA0A1B0GVL6 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM238LA0A1B0GVL6 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM238LA0A1B0GVL6 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM238LA0A1B0GVL6 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM238LA0A1B0GVL6 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM238LA0A1B0GVL6 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC14.24□□□□□ -0.13
TMEM238LA0A1B0GVL6 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM238LA0A1B0GVL6 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.24□□□□□ -0.13
TMEM238LA0A1B0GVL6 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.24□□□□□ -0.13
TMEM238LA0A1B0GVL6 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM238LA0A1B0GVL6 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM238LA0A1B0GVL6 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM238LA0A1B0GVL6 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM238LA0A1B0GVL6 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM238LA0A1B0GVL6 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.24□□□□□ -0.13
TMEM238LA0A1B0GVL6 PLK5-205ENST00000642079 1969 ntBASIC14.23□□□□□ -0.13
TMEM238LA0A1B0GVL6 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM238LA0A1B0GVL6 AC020907.5-201ENST00000624372 1936 ntBASIC14.23□□□□□ -0.13
TMEM238LA0A1B0GVL6 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TMEM238LA0A1B0GVL6 USF2-207ENST00000595068 1612 ntTSL 5 BASIC14.23□□□□□ -0.13
TMEM238LA0A1B0GVL6 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM238LA0A1B0GVL6 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC14.23□□□□□ -0.13
TMEM238LA0A1B0GVL6 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM238LA0A1B0GVL6 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM238LA0A1B0GVL6 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC14.23□□□□□ -0.13
TMEM238LA0A1B0GVL6 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms