Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 AC116050.2-201ENST00000612102 1779 ntBASIC15.22■□□□□ 0.03
TRBV6-1A0A0K0K1D8 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-1A0A0K0K1D8 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-1A0A0K0K1D8 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
TRBV6-1A0A0K0K1D8 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC15.22■□□□□ 0.03
TRBV6-1A0A0K0K1D8 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-1A0A0K0K1D8 KRT16P2-201ENST00000414673 1423 ntBASIC15.22■□□□□ 0.03
TRBV6-1A0A0K0K1D8 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-1A0A0K0K1D8 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-1A0A0K0K1D8 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV6-1A0A0K0K1D8 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TRBV6-1A0A0K0K1D8 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC15.22■□□□□ 0.03
TRBV6-1A0A0K0K1D8 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-1A0A0K0K1D8 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
TRBV6-1A0A0K0K1D8 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-1A0A0K0K1D8 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-1A0A0K0K1D8 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-1A0A0K0K1D8 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-1A0A0K0K1D8 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-1A0A0K0K1D8 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-1A0A0K0K1D8 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-1A0A0K0K1D8 KRT8P36-201ENST00000489121 1440 ntBASIC15.21■□□□□ 0.03
TRBV6-1A0A0K0K1D8 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-1A0A0K0K1D8 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC15.21■□□□□ 0.03
TRBV6-1A0A0K0K1D8 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TRBV6-1A0A0K0K1D8 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-1A0A0K0K1D8 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-1A0A0K0K1D8 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC15.21■□□□□ 0.03
TRBV6-1A0A0K0K1D8 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC15.21■□□□□ 0.03
TRBV6-1A0A0K0K1D8 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-1A0A0K0K1D8 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC15.21■□□□□ 0.03
TRBV6-1A0A0K0K1D8 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-1A0A0K0K1D8 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-1A0A0K0K1D8 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC15.21■□□□□ 0.03
TRBV6-1A0A0K0K1D8 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-1A0A0K0K1D8 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-1A0A0K0K1D8 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV6-1A0A0K0K1D8 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
TRBV6-1A0A0K0K1D8 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC15.21■□□□□ 0.02
TRBV6-1A0A0K0K1D8 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRBV6-1A0A0K0K1D8 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRBV6-1A0A0K0K1D8 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRBV6-1A0A0K0K1D8 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC15.21■□□□□ 0.02
TRBV6-1A0A0K0K1D8 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRBV6-1A0A0K0K1D8 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TRBV6-1A0A0K0K1D8 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-1A0A0K0K1D8 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-1A0A0K0K1D8 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC15.2■□□□□ 0.02
TRBV6-1A0A0K0K1D8 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-1A0A0K0K1D8 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-1A0A0K0K1D8 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
TRBV6-1A0A0K0K1D8 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-1A0A0K0K1D8 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-1A0A0K0K1D8 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC15.2■□□□□ 0.02
TRBV6-1A0A0K0K1D8 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC15.2■□□□□ 0.02
TRBV6-1A0A0K0K1D8 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC15.2■□□□□ 0.02
TRBV6-1A0A0K0K1D8 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-1A0A0K0K1D8 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-1A0A0K0K1D8 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC15.2■□□□□ 0.02
TRBV6-1A0A0K0K1D8 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC15.2■□□□□ 0.02
TRBV6-1A0A0K0K1D8 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC15.2■□□□□ 0.02
TRBV6-1A0A0K0K1D8 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-1A0A0K0K1D8 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC15.2■□□□□ 0.02
TRBV6-1A0A0K0K1D8 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC15.2■□□□□ 0.02
TRBV6-1A0A0K0K1D8 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-1A0A0K0K1D8 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TRBV6-1A0A0K0K1D8 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC15.2■□□□□ 0.02
TRBV6-1A0A0K0K1D8 MIR4767-201ENST00000582827 78 ntBASIC15.2■□□□□ 0.02
TRBV6-1A0A0K0K1D8 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC15.2■□□□□ 0.02
TRBV6-1A0A0K0K1D8 MPST-208ENST00000628507 698 ntTSL 5 BASIC15.2■□□□□ 0.02
TRBV6-1A0A0K0K1D8 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-1A0A0K0K1D8 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-1A0A0K0K1D8 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-1A0A0K0K1D8 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-1A0A0K0K1D8 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRBV6-1A0A0K0K1D8 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-1A0A0K0K1D8 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-1A0A0K0K1D8 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV6-1A0A0K0K1D8 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-1A0A0K0K1D8 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-1A0A0K0K1D8 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-1A0A0K0K1D8 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC15.19■□□□□ 0.02
TRBV6-1A0A0K0K1D8 AL691432.2-201ENST00000607222 2038 ntBASIC15.19■□□□□ 0.02
TRBV6-1A0A0K0K1D8 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-1A0A0K0K1D8 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-1A0A0K0K1D8 Z82202.1-201ENST00000623446 1880 ntBASIC15.19■□□□□ 0.02
TRBV6-1A0A0K0K1D8 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-1A0A0K0K1D8 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-1A0A0K0K1D8 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-1A0A0K0K1D8 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
TRBV6-1A0A0K0K1D8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRBV6-1A0A0K0K1D8 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC15.19■□□□□ 0.02
TRBV6-1A0A0K0K1D8 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-1A0A0K0K1D8 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-1A0A0K0K1D8 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC15.19■□□□□ 0.02
TRBV6-1A0A0K0K1D8 CPT2-209ENST00000636935 803 ntTSL 5 BASIC15.19■□□□□ 0.02
TRBV6-1A0A0K0K1D8 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-1A0A0K0K1D8 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TRBV6-1A0A0K0K1D8 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-1A0A0K0K1D8 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms