Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
IGHV4-28A0A0C4DH34 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
IGHV4-28A0A0C4DH34 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC14.73□□□□□ -0.05
IGHV4-28A0A0C4DH34 AC105020.6-201ENST00000621523 1217 ntBASIC14.73□□□□□ -0.05
IGHV4-28A0A0C4DH34 TBCB-214ENST00000629269 413 ntTSL 5 BASIC14.73□□□□□ -0.05
IGHV4-28A0A0C4DH34 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC14.73□□□□□ -0.05
IGHV4-28A0A0C4DH34 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
IGHV4-28A0A0C4DH34 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
IGHV4-28A0A0C4DH34 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
IGHV4-28A0A0C4DH34 AC087633.2-202ENST00000565166 1439 ntBASIC14.73□□□□□ -0.05
IGHV4-28A0A0C4DH34 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
IGHV4-28A0A0C4DH34 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
IGHV4-28A0A0C4DH34 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
IGHV4-28A0A0C4DH34 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC14.72□□□□□ -0.05
IGHV4-28A0A0C4DH34 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
IGHV4-28A0A0C4DH34 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
IGHV4-28A0A0C4DH34 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC14.72□□□□□ -0.05
IGHV4-28A0A0C4DH34 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
IGHV4-28A0A0C4DH34 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC14.72□□□□□ -0.05
IGHV4-28A0A0C4DH34 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
IGHV4-28A0A0C4DH34 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC14.72□□□□□ -0.05
IGHV4-28A0A0C4DH34 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
IGHV4-28A0A0C4DH34 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
IGHV4-28A0A0C4DH34 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC14.72□□□□□ -0.05
IGHV4-28A0A0C4DH34 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC14.72□□□□□ -0.05
IGHV4-28A0A0C4DH34 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
IGHV4-28A0A0C4DH34 AC121338.2-201ENST00000622535 1744 ntBASIC14.72□□□□□ -0.05
IGHV4-28A0A0C4DH34 STAC-204ENST00000457375 1366 ntTSL 2 BASIC14.72□□□□□ -0.05
IGHV4-28A0A0C4DH34 AF106564.1-201ENST00000607058 2553 ntBASIC14.72□□□□□ -0.05
IGHV4-28A0A0C4DH34 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC14.71□□□□□ -0.05
IGHV4-28A0A0C4DH34 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
IGHV4-28A0A0C4DH34 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
IGHV4-28A0A0C4DH34 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
IGHV4-28A0A0C4DH34 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC14.71□□□□□ -0.05
IGHV4-28A0A0C4DH34 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
IGHV4-28A0A0C4DH34 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC14.71□□□□□ -0.05
IGHV4-28A0A0C4DH34 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
IGHV4-28A0A0C4DH34 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC14.71□□□□□ -0.05
IGHV4-28A0A0C4DH34 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
IGHV4-28A0A0C4DH34 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
IGHV4-28A0A0C4DH34 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
IGHV4-28A0A0C4DH34 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
IGHV4-28A0A0C4DH34 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
IGHV4-28A0A0C4DH34 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC14.71□□□□□ -0.05
IGHV4-28A0A0C4DH34 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC14.71□□□□□ -0.05
IGHV4-28A0A0C4DH34 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
IGHV4-28A0A0C4DH34 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC14.71□□□□□ -0.05
IGHV4-28A0A0C4DH34 NME6-213ENST00000451657 871 ntTSL 2 BASIC14.71□□□□□ -0.05
IGHV4-28A0A0C4DH34 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC14.71□□□□□ -0.05
IGHV4-28A0A0C4DH34 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC14.71□□□□□ -0.05
IGHV4-28A0A0C4DH34 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC14.71□□□□□ -0.05
IGHV4-28A0A0C4DH34 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC14.71□□□□□ -0.05
IGHV4-28A0A0C4DH34 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC14.71□□□□□ -0.05
IGHV4-28A0A0C4DH34 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC14.71□□□□□ -0.05
IGHV4-28A0A0C4DH34 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC14.71□□□□□ -0.05
IGHV4-28A0A0C4DH34 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
IGHV4-28A0A0C4DH34 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC14.71□□□□□ -0.05
IGHV4-28A0A0C4DH34 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
IGHV4-28A0A0C4DH34 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
IGHV4-28A0A0C4DH34 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
IGHV4-28A0A0C4DH34 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC14.7□□□□□ -0.06
IGHV4-28A0A0C4DH34 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
IGHV4-28A0A0C4DH34 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
IGHV4-28A0A0C4DH34 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC14.7□□□□□ -0.06
IGHV4-28A0A0C4DH34 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
IGHV4-28A0A0C4DH34 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC14.7□□□□□ -0.06
IGHV4-28A0A0C4DH34 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
IGHV4-28A0A0C4DH34 MIR4651-201ENST00000582622 73 ntBASIC14.7□□□□□ -0.06
IGHV4-28A0A0C4DH34 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC14.7□□□□□ -0.06
IGHV4-28A0A0C4DH34 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC14.7□□□□□ -0.06
IGHV4-28A0A0C4DH34 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC14.7□□□□□ -0.06
IGHV4-28A0A0C4DH34 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
IGHV4-28A0A0C4DH34 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
IGHV4-28A0A0C4DH34 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
IGHV4-28A0A0C4DH34 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
IGHV4-28A0A0C4DH34 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
IGHV4-28A0A0C4DH34 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
IGHV4-28A0A0C4DH34 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
IGHV4-28A0A0C4DH34 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
IGHV4-28A0A0C4DH34 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
IGHV4-28A0A0C4DH34 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
IGHV4-28A0A0C4DH34 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
IGHV4-28A0A0C4DH34 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
IGHV4-28A0A0C4DH34 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
IGHV4-28A0A0C4DH34 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
IGHV4-28A0A0C4DH34 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC14.69□□□□□ -0.06
IGHV4-28A0A0C4DH34 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
IGHV4-28A0A0C4DH34 TSPY20P-201ENST00000450910 630 ntBASIC14.69□□□□□ -0.06
IGHV4-28A0A0C4DH34 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC14.69□□□□□ -0.06
IGHV4-28A0A0C4DH34 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
IGHV4-28A0A0C4DH34 AL356652.1-201ENST00000615962 565 ntBASIC14.69□□□□□ -0.06
IGHV4-28A0A0C4DH34 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
IGHV4-28A0A0C4DH34 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
IGHV4-28A0A0C4DH34 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC14.69□□□□□ -0.06
IGHV4-28A0A0C4DH34 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
IGHV4-28A0A0C4DH34 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
IGHV4-28A0A0C4DH34 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
IGHV4-28A0A0C4DH34 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
IGHV4-28A0A0C4DH34 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
IGHV4-28A0A0C4DH34 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms