Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 DYM-203ENST00000442713 2147 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV10A0A0B4J240 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV10A0A0B4J240 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC14.38□□□□□ -0.11
TRAV10A0A0B4J240 GCSHP5-201ENST00000443090 522 ntBASIC14.38□□□□□ -0.11
TRAV10A0A0B4J240 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV10A0A0B4J240 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV10A0A0B4J240 SOX15-203ENST00000570788 1093 ntBASIC14.38□□□□□ -0.11
TRAV10A0A0B4J240 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
TRAV10A0A0B4J240 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
TRAV10A0A0B4J240 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV10A0A0B4J240 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV10A0A0B4J240 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
TRAV10A0A0B4J240 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV10A0A0B4J240 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV10A0A0B4J240 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV10A0A0B4J240 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV10A0A0B4J240 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV10A0A0B4J240 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV10A0A0B4J240 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV10A0A0B4J240 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TRAV10A0A0B4J240 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
TRAV10A0A0B4J240 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TRAV10A0A0B4J240 MED17-221ENST00000639724 2317 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAV10A0A0B4J240 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV10A0A0B4J240 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV10A0A0B4J240 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAV10A0A0B4J240 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV10A0A0B4J240 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV10A0A0B4J240 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV10A0A0B4J240 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
TRAV10A0A0B4J240 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TRAV10A0A0B4J240 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
TRAV10A0A0B4J240 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC14.37□□□□□ -0.11
TRAV10A0A0B4J240 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV10A0A0B4J240 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV10A0A0B4J240 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV10A0A0B4J240 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
TRAV10A0A0B4J240 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV10A0A0B4J240 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV10A0A0B4J240 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV10A0A0B4J240 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TRAV10A0A0B4J240 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TRAV10A0A0B4J240 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV10A0A0B4J240 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
TRAV10A0A0B4J240 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV10A0A0B4J240 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV10A0A0B4J240 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV10A0A0B4J240 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
TRAV10A0A0B4J240 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
TRAV10A0A0B4J240 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV10A0A0B4J240 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV10A0A0B4J240 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TRAV10A0A0B4J240 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV10A0A0B4J240 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV10A0A0B4J240 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
TRAV10A0A0B4J240 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV10A0A0B4J240 GGT1-206ENST00000404223 952 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV10A0A0B4J240 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV10A0A0B4J240 AL390719.1-204ENST00000412397 1219 ntBASIC14.36□□□□□ -0.11
TRAV10A0A0B4J240 AC098590.1-201ENST00000468126 897 ntBASIC14.36□□□□□ -0.11
TRAV10A0A0B4J240 RPS2P52-201ENST00000469610 820 ntBASIC14.36□□□□□ -0.11
TRAV10A0A0B4J240 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV10A0A0B4J240 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV10A0A0B4J240 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
TRAV10A0A0B4J240 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV10A0A0B4J240 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC14.36□□□□□ -0.11
TRAV10A0A0B4J240 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV10A0A0B4J240 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV10A0A0B4J240 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV10A0A0B4J240 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV10A0A0B4J240 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV10A0A0B4J240 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV10A0A0B4J240 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV10A0A0B4J240 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV10A0A0B4J240 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV10A0A0B4J240 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV10A0A0B4J240 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
TRAV10A0A0B4J240 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV10A0A0B4J240 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV10A0A0B4J240 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRAV10A0A0B4J240 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TRAV10A0A0B4J240 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV10A0A0B4J240 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV10A0A0B4J240 AC011484.1-201ENST00000377652 1995 ntBASIC14.35□□□□□ -0.11
TRAV10A0A0B4J240 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV10A0A0B4J240 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV10A0A0B4J240 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV10A0A0B4J240 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
TRAV10A0A0B4J240 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC14.35□□□□□ -0.11
TRAV10A0A0B4J240 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TRAV10A0A0B4J240 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TRAV10A0A0B4J240 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV10A0A0B4J240 AC008403.3-201ENST00000598924 454 ntBASIC14.35□□□□□ -0.11
TRAV10A0A0B4J240 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV10A0A0B4J240 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV10A0A0B4J240 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV10A0A0B4J240 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV10A0A0B4J240 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV10A0A0B4J240 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV10A0A0B4J240 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms