Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAV2A0A0B4J234 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV2A0A0B4J234 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC15.38■□□□□ 0.05
TRAV2A0A0B4J234 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV2A0A0B4J234 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
TRAV2A0A0B4J234 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV2A0A0B4J234 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV2A0A0B4J234 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV2A0A0B4J234 PLK5-205ENST00000642079 1969 ntBASIC15.38■□□□□ 0.05
TRAV2A0A0B4J234 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV2A0A0B4J234 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV2A0A0B4J234 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV2A0A0B4J234 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TRAV2A0A0B4J234 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAV2A0A0B4J234 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV2A0A0B4J234 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV2A0A0B4J234 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV2A0A0B4J234 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV2A0A0B4J234 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAV2A0A0B4J234 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV2A0A0B4J234 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
TRAV2A0A0B4J234 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV2A0A0B4J234 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
TRAV2A0A0B4J234 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
TRAV2A0A0B4J234 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAV2A0A0B4J234 PLLP-204ENST00000569059 665 ntTSL 3 BASIC15.37■□□□□ 0.05
TRAV2A0A0B4J234 IKBKGP1-201ENST00000612193 1073 ntBASIC15.37■□□□□ 0.05
TRAV2A0A0B4J234 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
TRAV2A0A0B4J234 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV2A0A0B4J234 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV2A0A0B4J234 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV2A0A0B4J234 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV2A0A0B4J234 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV2A0A0B4J234 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAV2A0A0B4J234 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV2A0A0B4J234 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV2A0A0B4J234 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV2A0A0B4J234 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV2A0A0B4J234 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV2A0A0B4J234 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TRAV2A0A0B4J234 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV2A0A0B4J234 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV2A0A0B4J234 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV2A0A0B4J234 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV2A0A0B4J234 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV2A0A0B4J234 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV2A0A0B4J234 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV2A0A0B4J234 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV2A0A0B4J234 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV2A0A0B4J234 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV2A0A0B4J234 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV2A0A0B4J234 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
TRAV2A0A0B4J234 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV2A0A0B4J234 AC004911.1-201ENST00000416316 871 ntBASIC15.36■□□□□ 0.05
TRAV2A0A0B4J234 APTR-203ENST00000430801 583 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV2A0A0B4J234 CYP2T1P-201ENST00000432607 1285 ntBASIC15.36■□□□□ 0.05
TRAV2A0A0B4J234 VMO1-204ENST00000441199 741 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV2A0A0B4J234 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC15.36■□□□□ 0.05
TRAV2A0A0B4J234 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC15.36■□□□□ 0.05
TRAV2A0A0B4J234 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV2A0A0B4J234 MIR2861-201ENST00000636310 90 ntBASIC15.36■□□□□ 0.05
TRAV2A0A0B4J234 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV2A0A0B4J234 AC073111.5-205ENST00000641717 521 ntBASIC15.36■□□□□ 0.05
TRAV2A0A0B4J234 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV2A0A0B4J234 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV2A0A0B4J234 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
TRAV2A0A0B4J234 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV2A0A0B4J234 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV2A0A0B4J234 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV2A0A0B4J234 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV2A0A0B4J234 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV2A0A0B4J234 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV2A0A0B4J234 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC15.35■□□□□ 0.05
TRAV2A0A0B4J234 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TRAV2A0A0B4J234 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV2A0A0B4J234 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TRAV2A0A0B4J234 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV2A0A0B4J234 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV2A0A0B4J234 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV2A0A0B4J234 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV2A0A0B4J234 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV2A0A0B4J234 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV2A0A0B4J234 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TRAV2A0A0B4J234 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV2A0A0B4J234 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV2A0A0B4J234 AL512625.2-201ENST00000417533 625 ntBASIC15.35■□□□□ 0.05
TRAV2A0A0B4J234 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC15.35■□□□□ 0.05
TRAV2A0A0B4J234 AC026185.1-201ENST00000445748 174 ntBASIC15.35■□□□□ 0.05
TRAV2A0A0B4J234 DLX3-202ENST00000512495 834 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV2A0A0B4J234 AC005181.1-201ENST00000604782 1256 ntBASIC15.35■□□□□ 0.05
TRAV2A0A0B4J234 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV2A0A0B4J234 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TRAV2A0A0B4J234 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
TRAV2A0A0B4J234 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TRAV2A0A0B4J234 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV2A0A0B4J234 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV2A0A0B4J234 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV2A0A0B4J234 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV2A0A0B4J234 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC15.35■□□□□ 0.05
TRAV2A0A0B4J234 AC087633.2-202ENST00000565166 1439 ntBASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms