Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC14.39□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 AC005224.4-201ENST00000583262 1652 ntBASIC14.39□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 AC006128.1-201ENST00000624704 1661 ntBASIC14.39□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC14.38□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC14.38□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC14.38□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC14.38□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 AP006587.3-201ENST00000525742 1516 ntBASIC14.37□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC14.37□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-3A0A0A6YYJ7 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms