Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV27A0A087WT01 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV27A0A087WT01 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TRAV27A0A087WT01 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV27A0A087WT01 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV27A0A087WT01 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV27A0A087WT01 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV27A0A087WT01 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.44■□□□□ 0.54
TRAV27A0A087WT01 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TRAV27A0A087WT01 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
TRAV27A0A087WT01 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TRAV27A0A087WT01 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.44■□□□□ 0.54
TRAV27A0A087WT01 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.44■□□□□ 0.54
TRAV27A0A087WT01 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV27A0A087WT01 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV27A0A087WT01 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
TRAV27A0A087WT01 AC091799.1-201ENST00000422823 811 ntBASIC18.44■□□□□ 0.54
TRAV27A0A087WT01 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.44■□□□□ 0.54
TRAV27A0A087WT01 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV27A0A087WT01 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.44■□□□□ 0.54
TRAV27A0A087WT01 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.44■□□□□ 0.54
TRAV27A0A087WT01 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.44■□□□□ 0.54
TRAV27A0A087WT01 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.44■□□□□ 0.54
TRAV27A0A087WT01 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV27A0A087WT01 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV27A0A087WT01 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.44■□□□□ 0.54
TRAV27A0A087WT01 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
TRAV27A0A087WT01 SMG8-203ENST00000578922 2178 ntBASIC18.44■□□□□ 0.54
TRAV27A0A087WT01 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV27A0A087WT01 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV27A0A087WT01 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV27A0A087WT01 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TRAV27A0A087WT01 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.43■□□□□ 0.54
TRAV27A0A087WT01 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
TRAV27A0A087WT01 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.43■□□□□ 0.54
TRAV27A0A087WT01 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.43■□□□□ 0.54
TRAV27A0A087WT01 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV27A0A087WT01 RBM17P2-201ENST00000616397 1405 ntBASIC18.43■□□□□ 0.54
TRAV27A0A087WT01 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
TRAV27A0A087WT01 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TRAV27A0A087WT01 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV27A0A087WT01 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TRAV27A0A087WT01 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV27A0A087WT01 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV27A0A087WT01 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.43■□□□□ 0.54
TRAV27A0A087WT01 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.43■□□□□ 0.54
TRAV27A0A087WT01 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.43■□□□□ 0.54
TRAV27A0A087WT01 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.43■□□□□ 0.54
TRAV27A0A087WT01 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.43■□□□□ 0.54
TRAV27A0A087WT01 KRT18P61-201ENST00000585825 1298 ntBASIC18.43■□□□□ 0.54
TRAV27A0A087WT01 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
TRAV27A0A087WT01 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TRAV27A0A087WT01 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV27A0A087WT01 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV27A0A087WT01 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV27A0A087WT01 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV27A0A087WT01 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TRAV27A0A087WT01 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.42■□□□□ 0.54
TRAV27A0A087WT01 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.42■□□□□ 0.54
TRAV27A0A087WT01 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
TRAV27A0A087WT01 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV27A0A087WT01 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV27A0A087WT01 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.42■□□□□ 0.54
TRAV27A0A087WT01 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.42■□□□□ 0.54
TRAV27A0A087WT01 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.42■□□□□ 0.54
TRAV27A0A087WT01 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TRAV27A0A087WT01 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV27A0A087WT01 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.42■□□□□ 0.54
TRAV27A0A087WT01 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
TRAV27A0A087WT01 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV27A0A087WT01 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV27A0A087WT01 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV27A0A087WT01 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV27A0A087WT01 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.41■□□□□ 0.54
TRAV27A0A087WT01 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV27A0A087WT01 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TRAV27A0A087WT01 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV27A0A087WT01 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV27A0A087WT01 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV27A0A087WT01 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
TRAV27A0A087WT01 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV27A0A087WT01 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
TRAV27A0A087WT01 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV27A0A087WT01 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.41■□□□□ 0.54
TRAV27A0A087WT01 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TRAV27A0A087WT01 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV27A0A087WT01 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.41■□□□□ 0.54
TRAV27A0A087WT01 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.41■□□□□ 0.54
TRAV27A0A087WT01 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
TRAV27A0A087WT01 AC243732.1-201ENST00000612648 864 ntBASIC18.41■□□□□ 0.54
TRAV27A0A087WT01 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TRAV27A0A087WT01 AC019069.1-201ENST00000610008 1333 ntBASIC18.41■□□□□ 0.54
TRAV27A0A087WT01 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV27A0A087WT01 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV27A0A087WT01 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV27A0A087WT01 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.41■□□□□ 0.54
TRAV27A0A087WT01 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV27A0A087WT01 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV27A0A087WT01 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.4■□□□□ 0.54
TRAV27A0A087WT01 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms