Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 YBX1P1-201ENST00000445822 960 ntBASIC15.96■□□□□ 0.15
TRAV30A0A087WSZ9 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TRAV30A0A087WSZ9 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV30A0A087WSZ9 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV30A0A087WSZ9 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC15.96■□□□□ 0.15
TRAV30A0A087WSZ9 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC15.96■□□□□ 0.15
TRAV30A0A087WSZ9 TERF1P2-201ENST00000583350 1212 ntBASIC15.96■□□□□ 0.15
TRAV30A0A087WSZ9 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC15.96■□□□□ 0.15
TRAV30A0A087WSZ9 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC15.96■□□□□ 0.15
TRAV30A0A087WSZ9 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC15.96■□□□□ 0.15
TRAV30A0A087WSZ9 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC15.96■□□□□ 0.15
TRAV30A0A087WSZ9 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV30A0A087WSZ9 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV30A0A087WSZ9 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TRAV30A0A087WSZ9 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
TRAV30A0A087WSZ9 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRAV30A0A087WSZ9 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
TRAV30A0A087WSZ9 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV30A0A087WSZ9 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV30A0A087WSZ9 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TRAV30A0A087WSZ9 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC15.95■□□□□ 0.14
TRAV30A0A087WSZ9 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
TRAV30A0A087WSZ9 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV30A0A087WSZ9 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV30A0A087WSZ9 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV30A0A087WSZ9 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC15.95■□□□□ 0.14
TRAV30A0A087WSZ9 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV30A0A087WSZ9 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV30A0A087WSZ9 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV30A0A087WSZ9 PTPA-214ENST00000423100 988 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAV30A0A087WSZ9 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC15.95■□□□□ 0.14
TRAV30A0A087WSZ9 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAV30A0A087WSZ9 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAV30A0A087WSZ9 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC15.95■□□□□ 0.14
TRAV30A0A087WSZ9 SLC7A5P1-201ENST00000568957 537 ntBASIC15.95■□□□□ 0.14
TRAV30A0A087WSZ9 ADM-207ENST00000530439 1839 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAV30A0A087WSZ9 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV30A0A087WSZ9 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV30A0A087WSZ9 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV30A0A087WSZ9 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.95■□□□□ 0.14
TRAV30A0A087WSZ9 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV30A0A087WSZ9 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV30A0A087WSZ9 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV30A0A087WSZ9 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TRAV30A0A087WSZ9 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV30A0A087WSZ9 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV30A0A087WSZ9 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TRAV30A0A087WSZ9 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV30A0A087WSZ9 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV30A0A087WSZ9 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC15.94■□□□□ 0.14
TRAV30A0A087WSZ9 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV30A0A087WSZ9 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV30A0A087WSZ9 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV30A0A087WSZ9 COX20-201ENST00000366528 568 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV30A0A087WSZ9 JTB-203ENST00000368589 1216 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV30A0A087WSZ9 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV30A0A087WSZ9 AC243732.1-201ENST00000612648 864 ntBASIC15.94■□□□□ 0.14
TRAV30A0A087WSZ9 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TRAV30A0A087WSZ9 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC15.94■□□□□ 0.14
TRAV30A0A087WSZ9 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
TRAV30A0A087WSZ9 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TRAV30A0A087WSZ9 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
TRAV30A0A087WSZ9 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV30A0A087WSZ9 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV30A0A087WSZ9 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV30A0A087WSZ9 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV30A0A087WSZ9 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
TRAV30A0A087WSZ9 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV30A0A087WSZ9 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC15.94■□□□□ 0.14
TRAV30A0A087WSZ9 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV30A0A087WSZ9 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV30A0A087WSZ9 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
TRAV30A0A087WSZ9 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
TRAV30A0A087WSZ9 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
TRAV30A0A087WSZ9 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV30A0A087WSZ9 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV30A0A087WSZ9 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC15.93■□□□□ 0.14
TRAV30A0A087WSZ9 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV30A0A087WSZ9 AL020996.1-203ENST00000536896 2307 ntBASIC15.93■□□□□ 0.14
TRAV30A0A087WSZ9 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC15.93■□□□□ 0.14
TRAV30A0A087WSZ9 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
TRAV30A0A087WSZ9 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV30A0A087WSZ9 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC15.93■□□□□ 0.14
TRAV30A0A087WSZ9 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV30A0A087WSZ9 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC15.93■□□□□ 0.14
TRAV30A0A087WSZ9 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC15.93■□□□□ 0.14
TRAV30A0A087WSZ9 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
TRAV30A0A087WSZ9 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.93■□□□□ 0.14
TRAV30A0A087WSZ9 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV30A0A087WSZ9 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV30A0A087WSZ9 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV30A0A087WSZ9 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV30A0A087WSZ9 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV30A0A087WSZ9 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
TRAV30A0A087WSZ9 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV30A0A087WSZ9 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV30A0A087WSZ9 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC15.93■□□□□ 0.14
TRAV30A0A087WSZ9 AC138932.1-201ENST00000534164 6830 ntBASIC15.93■□□□□ 0.14
TRAV30A0A087WSZ9 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRAV30A0A087WSZ9 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms