Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
TRAV9-1A0A075B6T8 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV9-1A0A075B6T8 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV9-1A0A075B6T8 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV9-1A0A075B6T8 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV9-1A0A075B6T8 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
TRAV9-1A0A075B6T8 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV9-1A0A075B6T8 AC011484.1-201ENST00000377652 1995 ntBASIC15.31■□□□□ 0.04
TRAV9-1A0A075B6T8 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV9-1A0A075B6T8 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC15.31■□□□□ 0.04
TRAV9-1A0A075B6T8 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV9-1A0A075B6T8 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TRAV9-1A0A075B6T8 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV9-1A0A075B6T8 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV9-1A0A075B6T8 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV9-1A0A075B6T8 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
TRAV9-1A0A075B6T8 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
TRAV9-1A0A075B6T8 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV9-1A0A075B6T8 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV9-1A0A075B6T8 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV9-1A0A075B6T8 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV9-1A0A075B6T8 PWWP2AP1-201ENST00000429776 2273 ntBASIC15.3■□□□□ 0.04
TRAV9-1A0A075B6T8 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV9-1A0A075B6T8 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAV9-1A0A075B6T8 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAV9-1A0A075B6T8 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAV9-1A0A075B6T8 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAV9-1A0A075B6T8 VGF-203ENST00000611537 1622 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAV9-1A0A075B6T8 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAV9-1A0A075B6T8 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV9-1A0A075B6T8 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
TRAV9-1A0A075B6T8 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV9-1A0A075B6T8 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV9-1A0A075B6T8 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV9-1A0A075B6T8 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV9-1A0A075B6T8 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV9-1A0A075B6T8 LINC01465-201ENST00000408887 1940 ntBASIC15.29■□□□□ 0.04
TRAV9-1A0A075B6T8 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV9-1A0A075B6T8 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAV9-1A0A075B6T8 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV9-1A0A075B6T8 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
TRAV9-1A0A075B6T8 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TRAV9-1A0A075B6T8 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV9-1A0A075B6T8 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV9-1A0A075B6T8 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV9-1A0A075B6T8 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
TRAV9-1A0A075B6T8 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV9-1A0A075B6T8 RBM38-205ENST00000440234 686 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV9-1A0A075B6T8 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV9-1A0A075B6T8 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
TRAV9-1A0A075B6T8 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV9-1A0A075B6T8 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV9-1A0A075B6T8 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV9-1A0A075B6T8 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
TRAV9-1A0A075B6T8 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV9-1A0A075B6T8 TREX1-205ENST00000625293 1783 ntBASIC15.29■□□□□ 0.04
TRAV9-1A0A075B6T8 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV9-1A0A075B6T8 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC15.28■□□□□ 0.04
TRAV9-1A0A075B6T8 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV9-1A0A075B6T8 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAV9-1A0A075B6T8 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV9-1A0A075B6T8 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV9-1A0A075B6T8 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV9-1A0A075B6T8 PTGES2-AS1-201ENST00000443493 2100 ntBASIC15.28■□□□□ 0.04
TRAV9-1A0A075B6T8 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TRAV9-1A0A075B6T8 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV9-1A0A075B6T8 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV9-1A0A075B6T8 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV9-1A0A075B6T8 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV9-1A0A075B6T8 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
TRAV9-1A0A075B6T8 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV9-1A0A075B6T8 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV9-1A0A075B6T8 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV9-1A0A075B6T8 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRAV9-1A0A075B6T8 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV9-1A0A075B6T8 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TRAV9-1A0A075B6T8 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC15.28■□□□□ 0.04
TRAV9-1A0A075B6T8 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV9-1A0A075B6T8 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV9-1A0A075B6T8 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV9-1A0A075B6T8 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TRAV9-1A0A075B6T8 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TRAV9-1A0A075B6T8 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV9-1A0A075B6T8 AC009102.2-201ENST00000606772 1639 ntBASIC15.28■□□□□ 0.04
TRAV9-1A0A075B6T8 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV9-1A0A075B6T8 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV9-1A0A075B6T8 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV9-1A0A075B6T8 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAV9-1A0A075B6T8 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV9-1A0A075B6T8 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV9-1A0A075B6T8 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TRAV9-1A0A075B6T8 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
TRAV9-1A0A075B6T8 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAV9-1A0A075B6T8 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV9-1A0A075B6T8 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV9-1A0A075B6T8 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
TRAV9-1A0A075B6T8 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.27■□□□□ 0.04
TRAV9-1A0A075B6T8 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV9-1A0A075B6T8 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV9-1A0A075B6T8 TK2-202ENST00000417693 1046 ntTSL 2 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms