Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 PPARG-207ENST00000397015 1722 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 TRPM3-211ENST00000396280 4671 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 FGF1-204ENST00000378046 2582 ntAPPRIS P1 TSL 3 BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 THSD4-203ENST00000357769 3403 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SYCE2Q6PIF2 NR2C1-202ENST00000333003 4143 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 SAG-201ENST00000409110 1591 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 CEACAM22P-201ENST00000446628 3016 ntTSL 2 BASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 PRRG1-201ENST00000378628 4493 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 ANKRD13C-202ENST00000370944 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 SCNM1-202ENST00000368905 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 FNDC3A-201ENST00000378383 2037 ntTSL 2 BASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 AC006299.1-203ENST00000499625 2029 ntTSL 5 BASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 SLC17A6-201ENST00000263160 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 AFAP1-AS1-201ENST00000608442 6795 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 MEF2C-229ENST00000627659 2393 ntTSL 5 BASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 MAPK10-386ENST00000642038 2354 ntBASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 KCNMA1-AS1-206ENST00000600782 1755 ntTSL 5 BASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 ATG4A-202ENST00000345734 2129 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 AGMO-201ENST00000342526 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 ZNF248-208ENST00000611278 4204 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 RPS4X-201ENST00000316084 1526 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 LINC02260-201ENST00000508484 2216 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 OCM-201ENST00000242104 695 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 SNORA73A-201ENST00000364938 206 ntBASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 RN7SKP154-201ENST00000410136 290 ntBASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 RN7SKP110-201ENST00000410146 285 ntBASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 TRIM43CP-201ENST00000422468 1028 ntBASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 HAUS1P2-201ENST00000439908 784 ntBASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 AL356259.1-201ENST00000443554 1059 ntTSL 5 BASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 OR4A47-201ENST00000446524 1064 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 TTTY14-204ENST00000452584 860 ntTSL 3 BASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 AC020718.1-201ENST00000456031 556 ntTSL 4 BASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 RPL17P37-201ENST00000490729 548 ntBASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 OR7E28P-201ENST00000505191 975 ntBASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 AC008629.1-201ENST00000506486 812 ntTSL 3 BASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 AC034207.1-201ENST00000506742 948 ntBASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 IGLV7-35-201ENST00000523314 340 ntBASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 MIR100HG-211ENST00000531071 970 ntTSL 3 BASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 ZNF559-203ENST00000585352 967 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 AL445223.1-201ENST00000595998 1051 ntBASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 AL512413.1-201ENST00000606489 382 ntBASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 RN7SL536P-201ENST00000612366 290 ntBASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 CARMN-212ENST00000614896 536 ntTSL 5 BASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 RN7SL545P-201ENST00000620547 290 ntBASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 RN7SL759P-201ENST00000620768 290 ntBASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 AP003072.3-201ENST00000623456 594 ntBASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 AL353608.4-201ENST00000624487 1188 ntBASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 FBXL2-222ENST00000538892 2793 ntTSL 5 BASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 RSPH10B2-202ENST00000403107 3220 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 RSPH10B-203ENST00000405415 3222 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 ZNF562-208ENST00000590155 1712 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 AC044810.2-202ENST00000527847 2503 ntTSL 2 BASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 AC025031.5-201ENST00000623851 2523 ntBASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 SVOP-205ENST00000610966 6813 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 AC138869.3-201ENST00000563960 2486 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 RSL1D1-204ENST00000571133 5483 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 VPS45-201ENST00000369128 2224 ntTSL 2 BASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 ARHGEF9-234ENST00000637557 4775 ntTSL 5 BASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 ZNF185-212ENST00000539731 4334 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
SYCE2Q6PIF2 ATXN7L1-202ENST00000419735 5417 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SYCE2Q6PIF2 SECISBP2L-209ENST00000559471 7176 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
SYCE2Q6PIF2 USP46-207ENST00000508499 1419 ntTSL 2 BASIC9.06□□□□□ -0.96
SYCE2Q6PIF2 ATP9B-202ENST00000426216 4361 ntTSL 5 BASIC9.06□□□□□ -0.96
SYCE2Q6PIF2 CDKL5-209ENST00000635828 3823 ntTSL 5 BASIC9.06□□□□□ -0.96
SYCE2Q6PIF2 AMMECR1L-201ENST00000272647 4658 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SYCE2Q6PIF2 APOL1-205ENST00000422706 2901 ntAPPRIS ALT2 TSL 3 BASIC9.06□□□□□ -0.96
SYCE2Q6PIF2 SEC16B-204ENST00000464631 2948 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
SYCE2Q6PIF2 GGA3-202ENST00000538886 3766 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SYCE2Q6PIF2 GRB10-204ENST00000398812 4705 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SYCE2Q6PIF2 TMEM161B-201ENST00000296595 2594 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SYCE2Q6PIF2 AL049543.1-201ENST00000499525 2874 ntTSL 2 BASIC9.06□□□□□ -0.96
SYCE2Q6PIF2 RNU1-28P-201ENST00000383861 164 ntBASIC9.06□□□□□ -0.96
SYCE2Q6PIF2 RNU1-27P-201ENST00000383869 164 ntBASIC9.06□□□□□ -0.96
SYCE2Q6PIF2 RNU1-1-201ENST00000383925 164 ntBASIC9.06□□□□□ -0.96
SYCE2Q6PIF2 RNVU1-18-201ENST00000384010 164 ntBASIC9.06□□□□□ -0.96
SYCE2Q6PIF2 RNU1-2-201ENST00000384278 164 ntBASIC9.06□□□□□ -0.96
SYCE2Q6PIF2 RNU1-4-201ENST00000384659 164 ntBASIC9.06□□□□□ -0.96
SYCE2Q6PIF2 RNU1-3-201ENST00000384782 164 ntBASIC9.06□□□□□ -0.96
SYCE2Q6PIF2 VN2R17P-201ENST00000391712 832 ntBASIC9.06□□□□□ -0.96
SYCE2Q6PIF2 IGLC6-201ENST00000410078 317 ntBASIC9.06□□□□□ -0.96
SYCE2Q6PIF2 AC012354.2-201ENST00000423051 461 ntBASIC9.06□□□□□ -0.96
SYCE2Q6PIF2 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC9.06□□□□□ -0.96
SYCE2Q6PIF2 GUSBP4-201ENST00000423899 672 ntBASIC9.06□□□□□ -0.96
SYCE2Q6PIF2 TTC4P1-201ENST00000427137 1158 ntBASIC9.06□□□□□ -0.96
SYCE2Q6PIF2 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC9.06□□□□□ -0.96
SYCE2Q6PIF2 AC112493.1-202ENST00000436019 673 ntTSL 3 BASIC9.06□□□□□ -0.96
SYCE2Q6PIF2 AP002383.1-201ENST00000439405 720 ntBASIC9.06□□□□□ -0.96
SYCE2Q6PIF2 SNX18P8-201ENST00000455120 874 ntBASIC9.06□□□□□ -0.96
SYCE2Q6PIF2 AC092943.1-201ENST00000485389 878 ntBASIC9.06□□□□□ -0.96
SYCE2Q6PIF2 RN7SL135P-201ENST00000490144 278 ntBASIC9.06□□□□□ -0.96
SYCE2Q6PIF2 OR10Y1P-201ENST00000528485 974 ntBASIC9.06□□□□□ -0.96
SYCE2Q6PIF2 PFDN5-211ENST00000550846 392 ntTSL 2 BASIC9.06□□□□□ -0.96
SYCE2Q6PIF2 PFDN5-214ENST00000551018 847 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SYCE2Q6PIF2 SRMP2-201ENST00000553832 916 ntBASIC9.06□□□□□ -0.96
SYCE2Q6PIF2 HIF1A-AS2-201ENST00000554254 533 ntTSL 3 BASIC9.06□□□□□ -0.96
SYCE2Q6PIF2 AC090699.1-201ENST00000586264 321 ntBASIC9.06□□□□□ -0.96
SYCE2Q6PIF2 AC005616.1-201ENST00000592931 579 ntTSL 4 BASIC9.06□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms