Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 TPT1P5-201ENST00000511433 521 ntBASIC7.97□□□□□ -1.13
SNX18Q96RF0 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC7.97□□□□□ -1.13
SNX18Q96RF0 LINC00958-203ENST00000527945 1121 ntTSL 2 BASIC7.97□□□□□ -1.13
SNX18Q96RF0 CD63-206ENST00000548160 648 ntTSL 2 BASIC7.97□□□□□ -1.13
SNX18Q96RF0 AL591767.2-201ENST00000554984 173 ntBASIC7.97□□□□□ -1.13
SNX18Q96RF0 HNRNPCP3-201ENST00000560385 875 ntBASIC7.97□□□□□ -1.13
SNX18Q96RF0 AC027688.1-201ENST00000568471 584 ntTSL 4 BASIC7.97□□□□□ -1.13
SNX18Q96RF0 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC7.97□□□□□ -1.13
SNX18Q96RF0 AC107294.2-201ENST00000610001 701 ntTSL 3 BASIC7.97□□□□□ -1.13
SNX18Q96RF0 MIR6892-201ENST00000612346 115 ntBASIC7.97□□□□□ -1.13
SNX18Q96RF0 SEM1-223ENST00000623498 582 ntTSL 5 BASIC7.97□□□□□ -1.13
SNX18Q96RF0 AC084879.1-201ENST00000636165 1201 ntBASIC7.97□□□□□ -1.13
SNX18Q96RF0 RBMY1A1-201ENST00000303902 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
SNX18Q96RF0 RBMY1D-203ENST00000418956 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
SNX18Q96RF0 RBMY1B-203ENST00000619219 1491 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
SNX18Q96RF0 TP63-204ENST00000392460 1668 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
SNX18Q96RF0 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
SNX18Q96RF0 HDAC9-229ENST00000622668 4279 ntTSL 2 BASIC7.97□□□□□ -1.13
SNX18Q96RF0 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SNX18Q96RF0 ACSL1-211ENST00000515030 3948 ntAPPRIS P3 TSL 5 BASIC7.97□□□□□ -1.13
SNX18Q96RF0 AL365475.1-201ENST00000565135 1949 ntBASIC7.97□□□□□ -1.13
SNX18Q96RF0 AC008026.3-201ENST00000583426 1707 ntTSL 2 BASIC7.97□□□□□ -1.13
SNX18Q96RF0 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC7.97□□□□□ -1.13
SNX18Q96RF0 AC027369.1-202ENST00000534734 1330 ntBASIC7.97□□□□□ -1.13
SNX18Q96RF0 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC7.97□□□□□ -1.13
SNX18Q96RF0 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
SNX18Q96RF0 GTF2H1-201ENST00000265963 2982 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SNX18Q96RF0 VIT-203ENST00000389975 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
SNX18Q96RF0 TTC39A-212ENST00000447632 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
SNX18Q96RF0 EPHB2-201ENST00000374627 4014 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
SNX18Q96RF0 ICK-201ENST00000350082 6116 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SNX18Q96RF0 USP4-202ENST00000351842 3222 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
SNX18Q96RF0 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
SNX18Q96RF0 HPSE2-204ENST00000404542 3681 ntTSL 5 BASIC7.97□□□□□ -1.13
SNX18Q96RF0 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SNX18Q96RF0 EEF1A1P7-201ENST00000596811 1394 ntBASIC7.97□□□□□ -1.13
SNX18Q96RF0 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC7.96□□□□□ -1.13
SNX18Q96RF0 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
SNX18Q96RF0 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
SNX18Q96RF0 CLEC5A-207ENST00000551012 1420 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
SNX18Q96RF0 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.13
SNX18Q96RF0 MAP3K7CL-203ENST00000341618 1855 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
SNX18Q96RF0 AP4S1-211ENST00000616371 4595 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.13
SNX18Q96RF0 SWT1-202ENST00000367501 3001 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.13
SNX18Q96RF0 AC114776.1-201ENST00000414159 4395 ntTSL 5 BASIC7.96□□□□□ -1.13
SNX18Q96RF0 LINC01721-201ENST00000457274 2376 ntTSL 2 BASIC7.96□□□□□ -1.13
SNX18Q96RF0 FAM19A1-203ENST00000496687 1917 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
SNX18Q96RF0 AL353622.1-201ENST00000604716 1945 ntBASIC7.96□□□□□ -1.13
SNX18Q96RF0 MMP13-202ENST00000340273 1470 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
SNX18Q96RF0 CAST-244ENST00000515663 1473 ntTSL 2 BASIC7.96□□□□□ -1.13
SNX18Q96RF0 GOLGA6L1-201ENST00000614055 2620 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
SNX18Q96RF0 AURKA-206ENST00000395913 2169 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
SNX18Q96RF0 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
SNX18Q96RF0 SCGB2A1-201ENST00000244930 521 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
SNX18Q96RF0 RPL32-201ENST00000273223 567 ntTSL 3 BASIC7.96□□□□□ -1.14
SNX18Q96RF0 OR56B4-201ENST00000316529 1152 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
SNX18Q96RF0 GHRH-203ENST00000373614 570 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
SNX18Q96RF0 HMGN1-202ENST00000380747 709 ntTSL 3 BASIC7.96□□□□□ -1.14
SNX18Q96RF0 RNU1-28P-201ENST00000383861 164 ntBASIC7.96□□□□□ -1.14
SNX18Q96RF0 RNU1-27P-201ENST00000383869 164 ntBASIC7.96□□□□□ -1.14
SNX18Q96RF0 RNU1-1-201ENST00000383925 164 ntBASIC7.96□□□□□ -1.14
SNX18Q96RF0 RNVU1-18-201ENST00000384010 164 ntBASIC7.96□□□□□ -1.14
SNX18Q96RF0 RNU1-2-201ENST00000384278 164 ntBASIC7.96□□□□□ -1.14
SNX18Q96RF0 RNU1-4-201ENST00000384659 164 ntBASIC7.96□□□□□ -1.14
SNX18Q96RF0 RNU1-3-201ENST00000384782 164 ntBASIC7.96□□□□□ -1.14
SNX18Q96RF0 GLRX3P2-201ENST00000405027 1038 ntBASIC7.96□□□□□ -1.14
SNX18Q96RF0 AC097059.2-201ENST00000414039 592 ntTSL 3 BASIC7.96□□□□□ -1.14
SNX18Q96RF0 MRPS31P5-202ENST00000423686 920 ntBASIC7.96□□□□□ -1.14
SNX18Q96RF0 ACTG1P24-201ENST00000423783 877 ntBASIC7.96□□□□□ -1.14
SNX18Q96RF0 UBE2Q1-AS1-201ENST00000441613 432 ntTSL 3 BASIC7.96□□□□□ -1.14
SNX18Q96RF0 AL353072.1-201ENST00000446021 442 ntBASIC7.96□□□□□ -1.14
SNX18Q96RF0 AC012307.1-201ENST00000449242 197 ntTSL 3 BASIC7.96□□□□□ -1.14
SNX18Q96RF0 AL357127.1-201ENST00000451295 438 ntTSL 3 BASIC7.96□□□□□ -1.14
SNX18Q96RF0 ARHGAP31-AS1-201ENST00000466292 624 ntTSL 4 BASIC7.96□□□□□ -1.14
SNX18Q96RF0 AC018450.2-201ENST00000492307 368 ntTSL 3 BASIC7.96□□□□□ -1.14
SNX18Q96RF0 GNGT2-203ENST00000507680 585 ntAPPRIS P1 TSL 4 BASIC7.96□□□□□ -1.14
SNX18Q96RF0 GNGT2-206ENST00000515635 783 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
SNX18Q96RF0 RN7SKP52-201ENST00000516219 250 ntBASIC7.96□□□□□ -1.14
SNX18Q96RF0 AC100849.1-203ENST00000518417 723 ntTSL 4 BASIC7.96□□□□□ -1.14
SNX18Q96RF0 AC091946.1-201ENST00000522350 852 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
SNX18Q96RF0 ATM-209ENST00000526567 560 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
SNX18Q96RF0 AP003532.1-201ENST00000529936 310 ntBASIC7.96□□□□□ -1.14
SNX18Q96RF0 WARSP1-201ENST00000533936 454 ntBASIC7.96□□□□□ -1.14
SNX18Q96RF0 AL160314.2-201ENST00000554857 662 ntTSL 4 BASIC7.96□□□□□ -1.14
SNX18Q96RF0 AL049833.1-201ENST00000557745 840 ntTSL 3 BASIC7.96□□□□□ -1.14
SNX18Q96RF0 AC009432.1-201ENST00000560391 648 ntTSL 3 BASIC7.96□□□□□ -1.14
SNX18Q96RF0 AP007216.1-201ENST00000563932 385 ntTSL 3 BASIC7.96□□□□□ -1.14
SNX18Q96RF0 NDUFA3P6-201ENST00000571486 250 ntBASIC7.96□□□□□ -1.14
SNX18Q96RF0 AC018697.1-202ENST00000582650 592 ntTSL 4 BASIC7.96□□□□□ -1.14
SNX18Q96RF0 FAM95B1-210ENST00000591605 743 ntTSL 5 BASIC7.96□□□□□ -1.14
SNX18Q96RF0 STX8P1-201ENST00000603161 355 ntBASIC7.96□□□□□ -1.14
SNX18Q96RF0 ZNF678-205ENST00000608949 929 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
SNX18Q96RF0 U1.40-201ENST00000610976 164 ntBASIC7.96□□□□□ -1.14
SNX18Q96RF0 C5orf67-202ENST00000611197 354 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
SNX18Q96RF0 U1.27-201ENST00000615842 164 ntBASIC7.96□□□□□ -1.14
SNX18Q96RF0 LINC00226-202ENST00000618204 1052 ntTSL 2 BASIC7.96□□□□□ -1.14
SNX18Q96RF0 AC010332.1-201ENST00000620439 97 ntBASIC7.96□□□□□ -1.14
SNX18Q96RF0 LINC01132-202ENST00000641214 1085 ntBASIC7.96□□□□□ -1.14
SNX18Q96RF0 FGF5-201ENST00000312465 4555 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
SNX18Q96RF0 LINC00558-201ENST00000569422 3163 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms