Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
SLC1A1P43005 ZNF317-201ENST00000247956 4073 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
SLC1A1P43005 MRO-211ENST00000610511 5257 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SLC1A1P43005 ALDH7A1-227ENST00000636879 2501 ntTSL 5 BASIC8.99□□□□□ -0.97
SLC1A1P43005 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
SLC1A1P43005 CHI3L2-204ENST00000466741 1518 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
SLC1A1P43005 FNDC3A-206ENST00000541916 6328 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SLC1A1P43005 LIMCH1-218ENST00000513024 5129 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
SLC1A1P43005 SMG7-202ENST00000367537 5970 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
SLC1A1P43005 FPR3-202ENST00000595991 2222 ntAPPRIS P1 TSL 4 BASIC8.99□□□□□ -0.97
SLC1A1P43005 LINC02357-201ENST00000637313 1622 ntTSL 5 BASIC8.98□□□□□ -0.97
SLC1A1P43005 UBR4-201ENST00000375218 4031 ntTSL 2 BASIC8.98□□□□□ -0.97
SLC1A1P43005 AC006269.1-201ENST00000636752 2789 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
SLC1A1P43005 TRPM3-210ENST00000377111 4618 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SLC1A1P43005 FMOD-201ENST00000354955 3310 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SLC1A1P43005 WIPF3-203ENST00000409290 4002 ntAPPRIS P2 TSL 5 BASIC8.98□□□□□ -0.97
SLC1A1P43005 SLC15A1-202ENST00000376503 3106 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SLC1A1P43005 CNOT9-202ENST00000295701 1126 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SLC1A1P43005 RN7SKP45-201ENST00000363509 304 ntBASIC8.98□□□□□ -0.97
SLC1A1P43005 MAS1L-201ENST00000377127 1260 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
SLC1A1P43005 BPHL-202ENST00000380375 1050 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SLC1A1P43005 AC121338.1-201ENST00000380601 1287 ntTSL 2 BASIC8.98□□□□□ -0.97
SLC1A1P43005 ARHGEF7-IT1-201ENST00000423329 804 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SLC1A1P43005 AL133216.1-201ENST00000428915 727 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SLC1A1P43005 AL355483.4-201ENST00000432653 470 ntTSL 3 BASIC8.98□□□□□ -0.97
SLC1A1P43005 AF186996.1-201ENST00000466578 1015 ntBASIC8.98□□□□□ -0.97
SLC1A1P43005 RPS3P7-201ENST00000488662 726 ntBASIC8.98□□□□□ -0.97
SLC1A1P43005 AC098679.2-201ENST00000513067 365 ntTSL 2 BASIC8.98□□□□□ -0.97
SLC1A1P43005 AC073848.1-201ENST00000514339 457 ntTSL 3 BASIC8.98□□□□□ -0.97
SLC1A1P43005 STMN2-203ENST00000518491 585 ntTSL 2 BASIC8.98□□□□□ -0.97
SLC1A1P43005 GABARAPL1-214ENST00000545047 559 ntTSL 4 BASIC8.98□□□□□ -0.97
SLC1A1P43005 AL355916.3-201ENST00000556347 779 ntAPPRIS P1 TSL 4 BASIC8.98□□□□□ -0.97
SLC1A1P43005 LINC01572-202ENST00000563770 568 ntTSL 5 BASIC8.98□□□□□ -0.97
SLC1A1P43005 AC003098.1-201ENST00000591540 494 ntTSL 3 BASIC8.98□□□□□ -0.97
SLC1A1P43005 C1orf186-209ENST00000603488 727 ntAPPRIS P1 TSL 3 BASIC8.98□□□□□ -0.97
SLC1A1P43005 AC025031.3-201ENST00000611566 368 ntBASIC8.98□□□□□ -0.97
SLC1A1P43005 RFPL3-AS1_1.1-201ENST00000617561 88 ntBASIC8.98□□□□□ -0.97
SLC1A1P43005 TRIM37-214ENST00000625984 204 ntTSL 5 BASIC8.98□□□□□ -0.97
SLC1A1P43005 SIRPD-202ENST00000381623 1958 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
SLC1A1P43005 ZSCAN31-219ENST00000611469 2669 ntTSL 4 BASIC8.98□□□□□ -0.97
SLC1A1P43005 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
SLC1A1P43005 GM2A-201ENST00000357164 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SLC1A1P43005 AC009090.4-201ENST00000623921 3691 ntBASIC8.98□□□□□ -0.97
SLC1A1P43005 DHFR2-201ENST00000314636 3927 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SLC1A1P43005 EIF3H-201ENST00000276682 2041 ntTSL 2 BASIC8.98□□□□□ -0.97
SLC1A1P43005 GPR156-201ENST00000315843 4193 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
SLC1A1P43005 ZFP30-204ENST00000514101 4440 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SLC1A1P43005 CDH8-203ENST00000577390 9721 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SLC1A1P43005 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
SLC1A1P43005 GTF2IP12-202ENST00000634317 5052 ntTSL 5 BASIC8.98□□□□□ -0.97
SLC1A1P43005 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
SLC1A1P43005 PATE2-201ENST00000358524 1657 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
SLC1A1P43005 GCNT2-216ENST00000495262 2214 ntAPPRIS ALT1 TSL 2 BASIC8.97□□□□□ -0.97
SLC1A1P43005 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
SLC1A1P43005 AC068044.1-201ENST00000441585 1978 ntBASIC8.97□□□□□ -0.97
SLC1A1P43005 AC024132.1-201ENST00000382007 2509 ntTSL 2 BASIC8.97□□□□□ -0.97
SLC1A1P43005 LSM5-208ENST00000450169 2258 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SLC1A1P43005 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SLC1A1P43005 PALLD-206ENST00000505667 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
SLC1A1P43005 SKIV2L2-201ENST00000230640 4192 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SLC1A1P43005 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SLC1A1P43005 PHF21A-201ENST00000323180 3675 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SLC1A1P43005 PIN4-201ENST00000218432 1780 ntTSL 2 BASIC8.97□□□□□ -0.97
SLC1A1P43005 CEBPZOS-204ENST00000402297 3158 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
SLC1A1P43005 CWF19L1-201ENST00000354105 1815 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SLC1A1P43005 TRIO-201ENST00000344135 4065 ntTSL 2 BASIC8.97□□□□□ -0.97
SLC1A1P43005 XIAP-202ENST00000371199 8591 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SLC1A1P43005 ATP5I-201ENST00000304312 365 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SLC1A1P43005 OSCP1-202ENST00000354267 767 ntTSL 5 BASIC8.97□□□□□ -0.97
SLC1A1P43005 PTPRK-206ENST00000368215 4651 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
SLC1A1P43005 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC8.97□□□□□ -0.97
SLC1A1P43005 RN7SKP127-201ENST00000410443 354 ntBASIC8.97□□□□□ -0.97
SLC1A1P43005 RPL7L1P12-201ENST00000417594 729 ntBASIC8.97□□□□□ -0.97
SLC1A1P43005 AC097382.1-201ENST00000441093 591 ntTSL 5 BASIC8.97□□□□□ -0.97
SLC1A1P43005 ZEB1-AS1-203ENST00000441257 585 ntTSL 2 BASIC8.97□□□□□ -0.97
SLC1A1P43005 PROX1-AS1-203ENST00000451396 476 ntTSL 5 BASIC8.97□□□□□ -0.97
SLC1A1P43005 LINC01647-201ENST00000453135 1285 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SLC1A1P43005 AC069213.3-201ENST00000454858 474 ntBASIC8.97□□□□□ -0.97
SLC1A1P43005 ENPP7P1-201ENST00000509557 999 ntBASIC8.97□□□□□ -0.97
SLC1A1P43005 SPINK1-203ENST00000510027 1188 ntTSL 3 BASIC8.97□□□□□ -0.97
SLC1A1P43005 JRKL-AS1-201ENST00000511243 426 ntTSL 2 BASIC8.97□□□□□ -0.97
SLC1A1P43005 PRSS58-201ENST00000547058 913 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SLC1A1P43005 AC004221.1-201ENST00000592843 844 ntTSL 5 BASIC8.97□□□□□ -0.97
SLC1A1P43005 OR7A3P-201ENST00000595284 907 ntBASIC8.97□□□□□ -0.97
SLC1A1P43005 AC092723.1-201ENST00000599411 474 ntTSL 5 BASIC8.97□□□□□ -0.97
SLC1A1P43005 AL354718.2-201ENST00000618030 371 ntTSL 2 BASIC8.97□□□□□ -0.97
SLC1A1P43005 AL121785.1-201ENST00000624745 708 ntBASIC8.97□□□□□ -0.97
SLC1A1P43005 AC005086.2-201ENST00000624939 228 ntBASIC8.97□□□□□ -0.97
SLC1A1P43005 FAM238A-202ENST00000637359 442 ntBASIC8.97□□□□□ -0.97
SLC1A1P43005 FAM238C-205ENST00000640641 391 ntBASIC8.97□□□□□ -0.97
SLC1A1P43005 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
SLC1A1P43005 AC092894.1-201ENST00000486726 1563 ntTSL 5 BASIC8.97□□□□□ -0.97
SLC1A1P43005 GSTM4-203ENST00000369833 3990 ntTSL 5 BASIC8.97□□□□□ -0.97
SLC1A1P43005 RBBP5-202ENST00000367164 4290 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SLC1A1P43005 WDR11-AS1-203ENST00000598981 2242 ntTSL 5 BASIC8.97□□□□□ -0.97
SLC1A1P43005 FSD1L-202ENST00000374710 7664 ntTSL 2 BASIC8.97□□□□□ -0.97
SLC1A1P43005 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SLC1A1P43005 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SLC1A1P43005 USP17L26-202ENST00000610514 1677 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
SLC1A1P43005 USP17L20-202ENST00000613757 1677 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms