Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 TMEM106A-208ENST00000612339 3266 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
MTHFRP42898 PFKM-203ENST00000359794 3228 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
MTHFRP42898 TBC1D5-209ENST00000429383 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
MTHFRP42898 MAP4K4-220ENST00000627726 3135 ntTSL 5 BASIC9.17□□□□□ -0.94
MTHFRP42898 CEACAM20-202ENST00000614577 1530 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
MTHFRP42898 POLR1B-203ENST00000409894 4457 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
MTHFRP42898 SYT14-202ENST00000367019 2997 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
MTHFRP42898 CCDC14-203ENST00000409697 2962 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
MTHFRP42898 XIRP2-205ENST00000409605 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
MTHFRP42898 SLC14A1-202ENST00000402943 1390 ntTSL 2 BASIC9.17□□□□□ -0.94
MTHFRP42898 SLC30A8-201ENST00000427715 5430 ntTSL 2 BASIC9.17□□□□□ -0.94
MTHFRP42898 MRPL30-201ENST00000338148 2605 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
MTHFRP42898 AC107959.2-201ENST00000501897 2636 ntTSL 2 BASIC9.17□□□□□ -0.94
MTHFRP42898 GLRX-201ENST00000237858 1211 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
MTHFRP42898 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
MTHFRP42898 AKR1B1P8-201ENST00000418396 936 ntBASIC9.17□□□□□ -0.94
MTHFRP42898 AL136981.1-204ENST00000425090 461 ntTSL 3 BASIC9.17□□□□□ -0.94
MTHFRP42898 FTLP4-201ENST00000430740 493 ntBASIC9.17□□□□□ -0.94
MTHFRP42898 RN7SL538P-201ENST00000494227 304 ntBASIC9.17□□□□□ -0.94
MTHFRP42898 ASPH-206ENST00000517661 809 ntTSL 2 BASIC9.17□□□□□ -0.94
MTHFRP42898 IGKV2D-14-201ENST00000522473 355 ntBASIC9.17□□□□□ -0.94
MTHFRP42898 AP002957.1-201ENST00000525952 406 ntTSL 3 BASIC9.17□□□□□ -0.94
MTHFRP42898 AC107884.1-203ENST00000530846 628 ntTSL 3 BASIC9.17□□□□□ -0.94
MTHFRP42898 CRYAB-212ENST00000533280 545 ntTSL 2 BASIC9.17□□□□□ -0.94
MTHFRP42898 FOXG1-AS1-201ENST00000546560 538 ntTSL 3 BASIC9.17□□□□□ -0.94
MTHFRP42898 AL391807.1-201ENST00000603261 712 ntTSL 5 BASIC9.17□□□□□ -0.94
MTHFRP42898 FLJ36000-201ENST00000612344 3801 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
MTHFRP42898 AC138904.2-201ENST00000614412 107 ntBASIC9.17□□□□□ -0.94
MTHFRP42898 AC010722.1-202ENST00000618284 573 ntTSL 4 BASIC9.17□□□□□ -0.94
MTHFRP42898 TDGF1-201ENST00000296145 2513 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
MTHFRP42898 RBM25-205ENST00000527432 3375 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
MTHFRP42898 AC104447.1-201ENST00000624214 2124 ntBASIC9.17□□□□□ -0.94
MTHFRP42898 TNRC6C-AS1-201ENST00000589217 3192 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
MTHFRP42898 NVL-216ENST00000482491 3003 ntTSL 5 BASIC9.17□□□□□ -0.94
MTHFRP42898 ZNF322-201ENST00000415922 4817 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
MTHFRP42898 SLC8A1-206ENST00000406391 2814 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
MTHFRP42898 ABHD18-201ENST00000388795 5450 ntTSL 5 BASIC9.17□□□□□ -0.94
MTHFRP42898 NEK6-204ENST00000373603 3447 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
MTHFRP42898 AC012409.5-201ENST00000624746 3424 ntBASIC9.17□□□□□ -0.94
MTHFRP42898 CCR9-203ENST00000395963 2512 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
MTHFRP42898 AL023755.1-202ENST00000636459 1665 ntTSL 5 BASIC9.16□□□□□ -0.94
MTHFRP42898 ITIH4-201ENST00000266041 3336 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
MTHFRP42898 FCRL5-201ENST00000361835 5390 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
MTHFRP42898 KIZ-AS1-203ENST00000616177 5370 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
MTHFRP42898 SLFN13-211ENST00000542635 5921 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
MTHFRP42898 PLA2G4A-201ENST00000367466 2875 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
MTHFRP42898 OPTN-204ENST00000378752 3488 ntAPPRIS ALT1 TSL 1 (best) BASIC9.16□□□□□ -0.94
MTHFRP42898 PART1-202ENST00000506884 2068 ntTSL 2 BASIC9.16□□□□□ -0.94
MTHFRP42898 ZNF192P2-201ENST00000402215 1383 ntBASIC9.16□□□□□ -0.94
MTHFRP42898 SERPINB9-201ENST00000380698 4118 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
MTHFRP42898 KCNH5-204ENST00000420622 2711 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
MTHFRP42898 NDE1-201ENST00000396354 3221 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
MTHFRP42898 AC004148.2-201ENST00000575890 1938 ntTSL 5 BASIC9.16□□□□□ -0.94
MTHFRP42898 SNRPG-201ENST00000272348 625 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
MTHFRP42898 FABP1-201ENST00000295834 555 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
MTHFRP42898 LY6G6D-223ENST00000375825 402 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
MTHFRP42898 LDHAP4-201ENST00000397561 998 ntBASIC9.16□□□□□ -0.94
MTHFRP42898 CNN2P7-201ENST00000400583 932 ntBASIC9.16□□□□□ -0.94
MTHFRP42898 DCUN1D2-AS-201ENST00000414992 330 ntTSL 3 BASIC9.16□□□□□ -0.94
MTHFRP42898 AC006013.1-201ENST00000424888 758 ntTSL 3 BASIC9.16□□□□□ -0.94
MTHFRP42898 PAICSP5-201ENST00000430406 1217 ntBASIC9.16□□□□□ -0.94
MTHFRP42898 AC108448.2-201ENST00000431546 730 ntBASIC9.16□□□□□ -0.94
MTHFRP42898 TTC21B-AS1-202ENST00000443032 544 ntTSL 4 BASIC9.16□□□□□ -0.94
MTHFRP42898 LINC01937-201ENST00000448543 553 ntTSL 4 BASIC9.16□□□□□ -0.94
MTHFRP42898 LINC01883-201ENST00000457385 380 ntTSL 2 BASIC9.16□□□□□ -0.94
MTHFRP42898 RPL22L1-202ENST00000463836 506 ntAPPRIS ALT1 TSL 2 BASIC9.16□□□□□ -0.94
MTHFRP42898 TMED10P2-201ENST00000474255 612 ntBASIC9.16□□□□□ -0.94
MTHFRP42898 AC022973.1-201ENST00000490340 575 ntBASIC9.16□□□□□ -0.94
MTHFRP42898 PPM1K-204ENST00000508256 923 ntTSL 2 BASIC9.16□□□□□ -0.94
MTHFRP42898 FAXDC2-206ENST00000518651 536 ntTSL 4 BASIC9.16□□□□□ -0.94
MTHFRP42898 MTND6P20-201ENST00000522986 418 ntBASIC9.16□□□□□ -0.94
MTHFRP42898 AP003063.1-201ENST00000528496 855 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
MTHFRP42898 OR5BB1P-201ENST00000528843 939 ntBASIC9.16□□□□□ -0.94
MTHFRP42898 PSMC1P8-201ENST00000536820 1296 ntBASIC9.16□□□□□ -0.94
MTHFRP42898 AL590560.1-203ENST00000544342 408 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.94
MTHFRP42898 AC144548.1-201ENST00000549577 324 ntBASIC9.16□□□□□ -0.94
MTHFRP42898 AC024270.1-201ENST00000559181 404 ntBASIC9.16□□□□□ -0.94
MTHFRP42898 BCAP31P2-201ENST00000563143 399 ntBASIC9.16□□□□□ -0.94
MTHFRP42898 BCAP31P1-201ENST00000565437 385 ntBASIC9.16□□□□□ -0.94
MTHFRP42898 AC004477.2-201ENST00000583349 192 ntTSL 3 BASIC9.16□□□□□ -0.94
MTHFRP42898 APOC2-202ENST00000585786 880 ntTSL 2 BASIC9.16□□□□□ -0.94
MTHFRP42898 APOC2-204ENST00000591597 447 ntTSL 5 BASIC9.16□□□□□ -0.94
MTHFRP42898 ZNF493-205ENST00000596302 546 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
MTHFRP42898 FAM30B-201ENST00000611556 397 ntBASIC9.16□□□□□ -0.94
MTHFRP42898 AC099654.4-201ENST00000614168 1059 ntBASIC9.16□□□□□ -0.94
MTHFRP42898 PDZK1P1-203ENST00000616036 577 ntTSL 4 BASIC9.16□□□□□ -0.94
MTHFRP42898 CD200R1L-205ENST00000617549 762 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
MTHFRP42898 AC119619.1-201ENST00000619728 112 ntBASIC9.16□□□□□ -0.94
MTHFRP42898 NCOA4P4-201ENST00000513338 1861 ntBASIC9.16□□□□□ -0.94
MTHFRP42898 ZNF665-201ENST00000396424 4159 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
MTHFRP42898 RND3-203ENST00000409557 2372 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
MTHFRP42898 AC090525.2-201ENST00000551685 2270 ntBASIC9.16□□□□□ -0.94
MTHFRP42898 NUSAP1-212ENST00000560747 2256 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
MTHFRP42898 FAM107B-206ENST00000378470 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
MTHFRP42898 LINC01344-203ENST00000608183 2631 ntTSL 2 BASIC9.16□□□□□ -0.94
MTHFRP42898 UBE2U-206ENST00000611228 1550 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
MTHFRP42898 SMC6-207ENST00000448223 5233 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
MTHFRP42898 SFR1-202ENST00000369729 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
MTHFRP42898 ASCC1-202ENST00000317168 2002 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
MTHFRP42898 ATXN1-202ENST00000436367 10587 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms