Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 RNA5SP221-201ENST00000411271 103 ntBASIC9.16□□□□□ -0.94
LMO3Q8TAP4 TMEM211-202ENST00000423535 695 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
LMO3Q8TAP4 RPL15P1-201ENST00000439981 600 ntBASIC9.16□□□□□ -0.94
LMO3Q8TAP4 AC007237.1-201ENST00000442074 499 ntBASIC9.16□□□□□ -0.94
LMO3Q8TAP4 AL391825.1-202ENST00000458136 741 ntBASIC9.16□□□□□ -0.94
LMO3Q8TAP4 SOX2-OT-202ENST00000461063 566 ntTSL 3 BASIC9.16□□□□□ -0.94
LMO3Q8TAP4 AC008667.3-201ENST00000506892 553 ntTSL 4 BASIC9.16□□□□□ -0.94
LMO3Q8TAP4 AC055753.1-201ENST00000510575 889 ntBASIC9.16□□□□□ -0.94
LMO3Q8TAP4 AC023644.1-201ENST00000523380 859 ntTSL 5 BASIC9.16□□□□□ -0.94
LMO3Q8TAP4 SLC5A4P1-201ENST00000532944 612 ntBASIC9.16□□□□□ -0.94
LMO3Q8TAP4 CRYAB-212ENST00000533280 545 ntTSL 2 BASIC9.16□□□□□ -0.94
LMO3Q8TAP4 PCED1B-AS1-206ENST00000550426 683 ntTSL 5 BASIC9.16□□□□□ -0.94
LMO3Q8TAP4 PCED1B-AS1-211ENST00000552990 654 ntTSL 3 BASIC9.16□□□□□ -0.94
LMO3Q8TAP4 AL392023.2-201ENST00000554687 785 ntTSL 4 BASIC9.16□□□□□ -0.94
LMO3Q8TAP4 AC084759.2-202ENST00000557976 1053 ntTSL 5 BASIC9.16□□□□□ -0.94
LMO3Q8TAP4 LINC01227-202ENST00000561719 755 ntTSL 2 BASIC9.16□□□□□ -0.94
LMO3Q8TAP4 HP-207ENST00000562526 685 ntTSL 3 BASIC9.16□□□□□ -0.94
LMO3Q8TAP4 AC109597.1-201ENST00000564016 786 ntTSL 4 BASIC9.16□□□□□ -0.94
LMO3Q8TAP4 AC010650.1-201ENST00000567559 494 ntBASIC9.16□□□□□ -0.94
LMO3Q8TAP4 AC096708.1-201ENST00000584419 658 ntBASIC9.16□□□□□ -0.94
LMO3Q8TAP4 LINC00969-233ENST00000597871 839 ntTSL 5 BASIC9.16□□□□□ -0.94
LMO3Q8TAP4 Metazoa_SRP.211-201ENST00000635920 276 ntBASIC9.16□□□□□ -0.94
LMO3Q8TAP4 ZNF410-225ENST00000639051 936 ntTSL 5 BASIC9.16□□□□□ -0.94
LMO3Q8TAP4 PAPPA2-202ENST00000367662 9691 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
LMO3Q8TAP4 CD180-201ENST00000256447 5388 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
LMO3Q8TAP4 MCM8-202ENST00000378883 3574 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
LMO3Q8TAP4 AL135818.1-202ENST00000554096 1740 ntTSL 3 BASIC9.16□□□□□ -0.94
LMO3Q8TAP4 WDR11-AS1-203ENST00000598981 2242 ntTSL 5 BASIC9.16□□□□□ -0.94
LMO3Q8TAP4 CELF1-202ENST00000358597 2108 ntAPPRIS ALT1 TSL 1 (best) BASIC9.16□□□□□ -0.94
LMO3Q8TAP4 CFAP57-201ENST00000372492 4244 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
LMO3Q8TAP4 DEPDC1B-202ENST00000453022 1569 ntTSL 2 BASIC9.16□□□□□ -0.94
LMO3Q8TAP4 ADGRE3-205ENST00000599900 2099 ntTSL 5 BASIC9.16□□□□□ -0.94
LMO3Q8TAP4 ARHGEF9-222ENST00000636048 5059 ntTSL 5 BASIC9.15□□□□□ -0.94
LMO3Q8TAP4 PPP3CA-205ENST00000507176 1958 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
LMO3Q8TAP4 KIAA1671-202ENST00000401395 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
LMO3Q8TAP4 CNTNAP4-202ENST00000377504 4723 ntTSL 5 BASIC9.15□□□□□ -0.94
LMO3Q8TAP4 THNSL1-202ENST00000524413 3788 ntAPPRIS P1 TSL 3 BASIC9.15□□□□□ -0.94
LMO3Q8TAP4 GPM6B-201ENST00000316715 3275 ntAPPRIS ALT1 TSL 2 BASIC9.15□□□□□ -0.94
LMO3Q8TAP4 AL049833.3-201ENST00000623920 3738 ntBASIC9.15□□□□□ -0.94
LMO3Q8TAP4 SBF2-201ENST00000256190 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
LMO3Q8TAP4 AL391666.1-201ENST00000442570 2764 ntBASIC9.15□□□□□ -0.94
LMO3Q8TAP4 PPP6R3-218ENST00000529710 3228 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
LMO3Q8TAP4 TNIK-201ENST00000284483 4059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
LMO3Q8TAP4 ZNF471-201ENST00000308031 6287 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
LMO3Q8TAP4 AC091885.2-201ENST00000510391 1791 ntTSL 3 BASIC9.15□□□□□ -0.94
LMO3Q8TAP4 TYW5-201ENST00000354611 4306 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
LMO3Q8TAP4 RBBP9-201ENST00000337227 3861 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
LMO3Q8TAP4 AC131097.2-201ENST00000404031 595 ntAPPRIS ALT2 TSL 3 BASIC9.15□□□□□ -0.94
LMO3Q8TAP4 CYCSP5-201ENST00000415043 297 ntBASIC9.15□□□□□ -0.94
LMO3Q8TAP4 AL645937.5-202ENST00000415595 944 ntBASIC9.15□□□□□ -0.94
LMO3Q8TAP4 AL136981.1-204ENST00000425090 461 ntTSL 3 BASIC9.15□□□□□ -0.94
LMO3Q8TAP4 AC244034.1-201ENST00000428027 792 ntBASIC9.15□□□□□ -0.94
LMO3Q8TAP4 AC074121.1-201ENST00000441836 348 ntBASIC9.15□□□□□ -0.94
LMO3Q8TAP4 AC087501.2-201ENST00000466869 581 ntBASIC9.15□□□□□ -0.94
LMO3Q8TAP4 AC125618.1-201ENST00000472596 563 ntTSL 4 BASIC9.15□□□□□ -0.94
LMO3Q8TAP4 AL096701.3-202ENST00000483736 615 ntTSL 2 BASIC9.15□□□□□ -0.94
LMO3Q8TAP4 AP005135.1-201ENST00000532071 714 ntTSL 3 BASIC9.15□□□□□ -0.94
LMO3Q8TAP4 AL096869.2-202ENST00000557007 1237 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
LMO3Q8TAP4 AP007216.1-201ENST00000563932 385 ntTSL 3 BASIC9.15□□□□□ -0.94
LMO3Q8TAP4 APOOP5-202ENST00000564761 566 ntBASIC9.15□□□□□ -0.94
LMO3Q8TAP4 AL121928.1-201ENST00000608017 521 ntBASIC9.15□□□□□ -0.94
LMO3Q8TAP4 AC010722.1-202ENST00000618284 573 ntTSL 4 BASIC9.15□□□□□ -0.94
LMO3Q8TAP4 AC009971.1-201ENST00000634253 673 ntTSL 5 BASIC9.15□□□□□ -0.94
LMO3Q8TAP4 LINC00284-202ENST00000439707 2521 ntTSL 5 BASIC9.15□□□□□ -0.94
LMO3Q8TAP4 LOXHD1-212ENST00000582408 3755 ntTSL 2 BASIC9.15□□□□□ -0.94
LMO3Q8TAP4 VPS4B-201ENST00000238497 3324 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
LMO3Q8TAP4 LUC7L3-208ENST00000505658 7040 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
LMO3Q8TAP4 EIF3H-201ENST00000276682 2041 ntTSL 2 BASIC9.15□□□□□ -0.94
LMO3Q8TAP4 UBR5-AS1-201ENST00000499653 2048 ntTSL 2 BASIC9.15□□□□□ -0.94
LMO3Q8TAP4 XAF1-202ENST00000361842 3623 ntAPPRIS P4 TSL 1 (best) BASIC9.15□□□□□ -0.94
LMO3Q8TAP4 LINC01856-201ENST00000450840 2398 ntTSL 2 BASIC9.15□□□□□ -0.95
LMO3Q8TAP4 MYH2-206ENST00000622564 2379 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
LMO3Q8TAP4 NPSR1-202ENST00000360581 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
LMO3Q8TAP4 AL121835.2-201ENST00000624253 3502 ntBASIC9.15□□□□□ -0.95
LMO3Q8TAP4 BSN-201ENST00000296452 15955 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
LMO3Q8TAP4 GM2A-201ENST00000357164 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
LMO3Q8TAP4 AL512504.2-201ENST00000445455 1909 ntBASIC9.15□□□□□ -0.95
LMO3Q8TAP4 REV3L-202ENST00000368802 10701 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
LMO3Q8TAP4 ATP8A2-204ENST00000381655 9575 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
LMO3Q8TAP4 CDKN2B-AS1-203ENST00000428597 3835 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
LMO3Q8TAP4 KCNJ15-221ENST00000613499 3049 ntAPPRIS P1 TSL 4 BASIC9.15□□□□□ -0.95
LMO3Q8TAP4 CD101-201ENST00000256652 3283 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
LMO3Q8TAP4 LCLAT1-201ENST00000309052 5060 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
LMO3Q8TAP4 MPI-213ENST00000566377 2809 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
LMO3Q8TAP4 USP6-205ENST00000574788 8464 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
LMO3Q8TAP4 CYB5D1-201ENST00000332439 3509 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
LMO3Q8TAP4 STK36-201ENST00000295709 4933 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
LMO3Q8TAP4 ETV3-202ENST00000368192 5254 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
LMO3Q8TAP4 RUNX1T1-203ENST00000396218 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC9.14□□□□□ -0.95
LMO3Q8TAP4 WDFY4-201ENST00000325239 10079 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
LMO3Q8TAP4 AL136140.2-201ENST00000624717 1705 ntBASIC9.14□□□□□ -0.95
LMO3Q8TAP4 PALM2-AKAP2-202ENST00000374530 7507 ntTSL 2 BASIC9.14□□□□□ -0.95
LMO3Q8TAP4 RELN-201ENST00000343529 11565 ntAPPRIS P3 TSL 5 BASIC9.14□□□□□ -0.95
LMO3Q8TAP4 RELN-202ENST00000424685 11571 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
LMO3Q8TAP4 RELN-203ENST00000428762 11571 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
LMO3Q8TAP4 LAX1-203ENST00000442561 3023 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
LMO3Q8TAP4 ZBTB20-AS1-203ENST00000475939 1687 ntTSL 2 BASIC9.14□□□□□ -0.95
LMO3Q8TAP4 ZNF185-204ENST00000370268 4305 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
LMO3Q8TAP4 NCOA4-201ENST00000578454 2307 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
LMO3Q8TAP4 GNA12-203ENST00000407904 3918 ntTSL 2 BASIC9.14□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms