Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 SMIM8-201ENST00000229570 2405 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
MTHFRP42898 ATP6V0A1-201ENST00000264649 4110 ntAPPRIS P4 TSL 1 (best) BASIC9.29□□□□□ -0.92
MTHFRP42898 CDC27-204ENST00000527547 2579 ntAPPRIS ALT1 TSL 1 (best) BASIC9.28□□□□□ -0.92
MTHFRP42898 ABCC2-201ENST00000370434 1714 ntTSL 2 BASIC9.28□□□□□ -0.92
MTHFRP42898 ZBTB21-203ENST00000398499 5806 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
MTHFRP42898 SP140-204ENST00000417495 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
MTHFRP42898 CSNK2A1-202ENST00000349736 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
MTHFRP42898 KCNMA1-AS1-206ENST00000600782 1755 ntTSL 5 BASIC9.28□□□□□ -0.92
MTHFRP42898 MFAP3L-202ENST00000393702 1505 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
MTHFRP42898 LINC02525-202ENST00000435043 1505 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
MTHFRP42898 FABP5-201ENST00000297258 851 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
MTHFRP42898 CPSF4L-201ENST00000344935 647 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
MTHFRP42898 TAC1-203ENST00000350485 975 ntTSL 5 BASIC9.28□□□□□ -0.92
MTHFRP42898 RN7SKP37-201ENST00000364494 296 ntBASIC9.28□□□□□ -0.92
MTHFRP42898 LST1-211ENST00000376110 433 ntTSL 3 BASIC9.28□□□□□ -0.92
MTHFRP42898 RAD51B-201ENST00000390683 922 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
MTHFRP42898 LINC01363-201ENST00000426709 971 ntTSL 5 BASIC9.28□□□□□ -0.92
MTHFRP42898 AL355478.1-201ENST00000431686 821 ntTSL 5 BASIC9.28□□□□□ -0.92
MTHFRP42898 AC099568.1-201ENST00000432395 509 ntTSL 3 BASIC9.28□□□□□ -0.92
MTHFRP42898 AC002076.1-201ENST00000435257 527 ntTSL 2 BASIC9.28□□□□□ -0.92
MTHFRP42898 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC9.28□□□□□ -0.92
MTHFRP42898 AL451081.2-201ENST00000448115 933 ntBASIC9.28□□□□□ -0.92
MTHFRP42898 AC002384.1-202ENST00000470135 673 ntTSL 5 BASIC9.28□□□□□ -0.92
MTHFRP42898 AC138866.1-201ENST00000514522 497 ntBASIC9.28□□□□□ -0.92
MTHFRP42898 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC9.28□□□□□ -0.92
MTHFRP42898 RAN-211ENST00000541679 572 ntTSL 5 BASIC9.28□□□□□ -0.92
MTHFRP42898 PCSK6-AS1-201ENST00000558696 639 ntTSL 3 BASIC9.28□□□□□ -0.92
MTHFRP42898 AC103810.2-201ENST00000577938 559 ntTSL 5 BASIC9.28□□□□□ -0.92
MTHFRP42898 AC006120.1-201ENST00000579375 546 ntBASIC9.28□□□□□ -0.92
MTHFRP42898 AC011487.1-202ENST00000597004 551 ntTSL 4 BASIC9.28□□□□□ -0.92
MTHFRP42898 ZNF611-214ENST00000600943 560 ntTSL 4 BASIC9.28□□□□□ -0.92
MTHFRP42898 AC093458.1-201ENST00000608912 222 ntBASIC9.28□□□□□ -0.92
MTHFRP42898 AP000787.3-201ENST00000634407 307 ntBASIC9.28□□□□□ -0.92
MTHFRP42898 MIR3191-201ENST00000636300 76 ntBASIC9.28□□□□□ -0.92
MTHFRP42898 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
MTHFRP42898 CYP39A1-201ENST00000275016 2176 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
MTHFRP42898 TCL6-207ENST00000483087 2194 ntTSL 2 BASIC9.28□□□□□ -0.92
MTHFRP42898 ZRANB2-202ENST00000370920 3078 ntAPPRIS P4 TSL 1 (best) BASIC9.28□□□□□ -0.92
MTHFRP42898 OR1D2-203ENST00000641833 4887 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
MTHFRP42898 LINC01539-201ENST00000587904 2068 ntTSL 2 BASIC9.28□□□□□ -0.92
MTHFRP42898 AL139020.1-203ENST00000556386 2738 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
MTHFRP42898 CREM-204ENST00000345491 2220 ntAPPRIS P4 TSL 1 (best) BASIC9.28□□□□□ -0.92
MTHFRP42898 EPB41L2-221ENST00000529208 3023 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
MTHFRP42898 AC091173.1-201ENST00000505627 2750 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
MTHFRP42898 OR8D4-202ENST00000641687 2904 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
MTHFRP42898 TIMP2-203ENST00000585421 3345 ntTSL 3 BASIC9.28□□□□□ -0.92
MTHFRP42898 WDFY2-201ENST00000298125 9321 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
MTHFRP42898 CTNNA1-243ENST00000540387 2684 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
MTHFRP42898 CACNA1C-225ENST00000480911 6811 ntTSL 5 BASIC9.28□□□□□ -0.92
MTHFRP42898 CASP5-202ENST00000393141 1488 ntTSL 5 BASIC9.28□□□□□ -0.92
MTHFRP42898 CAMK2D-213ENST00000514328 1497 ntTSL 5 BASIC9.28□□□□□ -0.92
MTHFRP42898 TMBIM6-201ENST00000267115 2836 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.92
MTHFRP42898 GIGYF2-205ENST00000409547 5978 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
MTHFRP42898 R3HDM2-207ENST00000441731 4076 ntTSL 5 BASIC9.27□□□□□ -0.92
MTHFRP42898 ATL3-201ENST00000398868 7135 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.92
MTHFRP42898 NFIA-206ENST00000371191 1916 ntTSL 5 BASIC9.27□□□□□ -0.93
MTHFRP42898 ANO2-211ENST00000546188 3702 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
MTHFRP42898 YME1L1-203ENST00000376016 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
MTHFRP42898 NOL11-201ENST00000253247 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
MTHFRP42898 NYAP2-202ENST00000636099 5461 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
MTHFRP42898 SERPINB8-202ENST00000353706 3387 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
MTHFRP42898 LINC02028-202ENST00000432154 2666 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
MTHFRP42898 SAYSD1-202ENST00000373249 1972 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
MTHFRP42898 VWA5A-204ENST00000449321 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
MTHFRP42898 TSSK4-201ENST00000287913 1257 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
MTHFRP42898 LINC00970-201ENST00000366408 1129 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
MTHFRP42898 FETUB-202ENST00000382134 1055 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
MTHFRP42898 SNORA35-201ENST00000386104 128 ntBASIC9.27□□□□□ -0.93
MTHFRP42898 APLF-202ENST00000394342 1182 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
MTHFRP42898 VN2R10P-201ENST00000411871 853 ntBASIC9.27□□□□□ -0.93
MTHFRP42898 UPF3AP1-201ENST00000413731 1126 ntBASIC9.27□□□□□ -0.93
MTHFRP42898 MAPK6PS6-201ENST00000420752 1053 ntBASIC9.27□□□□□ -0.93
MTHFRP42898 AL136982.6-201ENST00000444180 1238 ntTSL 2 BASIC9.27□□□□□ -0.93
MTHFRP42898 RPL23AP10-201ENST00000489946 466 ntBASIC9.27□□□□□ -0.93
MTHFRP42898 RN7SL598P-201ENST00000494391 294 ntBASIC9.27□□□□□ -0.93
MTHFRP42898 LINC01948-201ENST00000506836 656 ntTSL 2 BASIC9.27□□□□□ -0.93
MTHFRP42898 IGLVI-68-201ENST00000519525 345 ntBASIC9.27□□□□□ -0.93
MTHFRP42898 NOVA1-AS1-201ENST00000547786 818 ntTSL 3 BASIC9.27□□□□□ -0.93
MTHFRP42898 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC9.27□□□□□ -0.93
MTHFRP42898 OR11J5P-201ENST00000556889 934 ntBASIC9.27□□□□□ -0.93
MTHFRP42898 AC009118.1-201ENST00000566019 374 ntTSL 2 BASIC9.27□□□□□ -0.93
MTHFRP42898 AL139220.2-217ENST00000609027 940 ntTSL 5 BASIC9.27□□□□□ -0.93
MTHFRP42898 MIR6736-201ENST00000616799 59 ntBASIC9.27□□□□□ -0.93
MTHFRP42898 AC244517.10-201ENST00000624396 548 ntAPPRIS P1 TSL 4 BASIC9.27□□□□□ -0.93
MTHFRP42898 AC247036.7-201ENST00000639643 304 ntBASIC9.27□□□□□ -0.93
MTHFRP42898 CD109-202ENST00000422508 9221 ntAPPRIS ALT1 TSL 1 (best) BASIC9.27□□□□□ -0.93
MTHFRP42898 PDE4D-207ENST00000405755 2294 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
MTHFRP42898 NCKAP5-201ENST00000317721 7593 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
MTHFRP42898 NCKAP5-205ENST00000409261 7594 ntAPPRIS P4 TSL 5 BASIC9.27□□□□□ -0.93
MTHFRP42898 APOL2-202ENST00000358502 2551 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
MTHFRP42898 AC092132.2-201ENST00000611227 2744 ntBASIC9.27□□□□□ -0.93
MTHFRP42898 CRX-207ENST00000613299 4193 ntTSL 3 BASIC9.27□□□□□ -0.93
MTHFRP42898 URM1-202ENST00000372850 3045 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
MTHFRP42898 TRY2P-202ENST00000616556 2039 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
MTHFRP42898 NHLRC3-202ENST00000379600 3549 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
MTHFRP42898 ZSCAN16-201ENST00000340487 1328 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
MTHFRP42898 NTNG2-201ENST00000372179 3984 ntTSL 5 BASIC9.27□□□□□ -0.93
MTHFRP42898 CYP2C18-202ENST00000339022 1471 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
MTHFRP42898 ARG1-202ENST00000356962 1468 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
MTHFRP42898 PPP2R1B-201ENST00000311129 2082 ntAPPRIS P4 TSL 1 (best) BASIC9.27□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms