Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC090079.1-201ENST00000572092 1183 ntBASIC9.25□□□□□ -0.93
LMO3Q8TAP4 LINC01927-201ENST00000582231 712 ntTSL 3 BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 AC004253.1-201ENST00000583236 488 ntTSL 5 BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 AC004221.1-201ENST00000592843 844 ntTSL 5 BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 AC063950.1-202ENST00000600133 568 ntBASIC9.25□□□□□ -0.93
LMO3Q8TAP4 AC018695.4-201ENST00000602706 689 ntTSL 5 BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 GNG2-216ENST00000615906 1294 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 LIAS-210ENST00000638451 1159 ntTSL 5 BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 CTNND1-215ENST00000526938 3489 ntTSL 5 BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 PSG8-203ENST00000404209 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 FBXO38-202ENST00000340253 4424 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 GPR161-210ENST00000546300 7388 ntTSL 2 BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 OR1S1-202ENST00000641544 1474 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 USP17L26-202ENST00000610514 1677 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 USP17L20-202ENST00000613757 1677 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 USP17L11-202ENST00000613973 1677 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 USP17L17-202ENST00000614762 1677 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 USP17L19-202ENST00000615989 1677 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 USP17L13-202ENST00000616303 1677 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 USP17L18-202ENST00000619296 1677 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 USP17L25-202ENST00000621472 1677 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 USP17L22-202ENST00000622009 1677 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 USP17L24-202ENST00000622713 1677 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 MMGT1-201ENST00000305963 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 NUMA1-232ENST00000613205 3940 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 OR1D2-203ENST00000641833 4887 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 LINC00939-202ENST00000507313 2819 ntTSL 2 BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 CHI3L2-204ENST00000466741 1518 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 SORBS2-204ENST00000355634 4622 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
LMO3Q8TAP4 FBXO38-203ENST00000394370 4132 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 AC008543.2-201ENST00000436907 1383 ntBASIC9.24□□□□□ -0.93
LMO3Q8TAP4 AC024337.1-201ENST00000558860 1562 ntTSL 4 BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 POU6F2-207ENST00000518318 5925 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 LINC02436-202ENST00000509017 2186 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 PIGN-251ENST00000640876 6045 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 OPHN1-201ENST00000355520 7879 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 CHRDL1-203ENST00000394797 2413 ntAPPRIS P3 TSL 5 BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 DHFR-202ENST00000504396 1447 ntTSL 2 BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 AC008938.1-201ENST00000566929 6510 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 MYO6-204ENST00000369985 8575 ntTSL 5 BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 ASTE1-201ENST00000264992 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 RPAP1-202ENST00000561603 3906 ntTSL 5 BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 NOTCH2-201ENST00000256646 11389 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 FRG2-201ENST00000378763 2084 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 FRG2B-202ENST00000443774 2094 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 ZKSCAN5-203ENST00000451158 3111 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 AL627309.1-201ENST00000466430 2748 ntTSL 5 BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 MMP13-202ENST00000340273 1470 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 AL390728.4-201ENST00000421406 1465 ntBASIC9.24□□□□□ -0.93
LMO3Q8TAP4 C22orf15-202ENST00000382821 646 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 Z68871.1-201ENST00000426528 1133 ntTSL 5 BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 AL355478.1-201ENST00000431686 821 ntTSL 5 BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 AL353194.1-201ENST00000451507 441 ntTSL 2 BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 RN7SL337P-201ENST00000462468 301 ntBASIC9.24□□□□□ -0.93
LMO3Q8TAP4 GUSBP3-201ENST00000509348 423 ntBASIC9.24□□□□□ -0.93
LMO3Q8TAP4 ATOX1-206ENST00000522710 591 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 AP002469.1-201ENST00000526011 1043 ntBASIC9.24□□□□□ -0.93
LMO3Q8TAP4 AP000873.3-201ENST00000531869 766 ntTSL 5 BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 AP000820.1-201ENST00000545912 506 ntTSL 3 BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 RPL41-204ENST00000546591 699 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 LINC02301-202ENST00000555150 428 ntTSL 3 BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 LINC00520-204ENST00000556417 778 ntTSL 3 BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 AC036108.1-201ENST00000559468 588 ntTSL 4 BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 AC025280.1-201ENST00000562393 260 ntTSL 2 BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 MIR3972-201ENST00000582732 87 ntBASIC9.24□□□□□ -0.93
LMO3Q8TAP4 AC005580.1-202ENST00000587140 562 ntTSL 5 BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 AC100843.3-201ENST00000591796 259 ntBASIC9.24□□□□□ -0.93
LMO3Q8TAP4 AL662797.3-201ENST00000607476 773 ntBASIC9.24□□□□□ -0.93
LMO3Q8TAP4 AC097717.1-251ENST00000608419 183 ntTSL 5 BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 CU633967.1-202ENST00000623449 560 ntTSL 5 BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 SEM1-224ENST00000623693 729 ntTSL 5 BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 CU638689.5-201ENST00000623892 1032 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 AC084879.1-201ENST00000636165 1201 ntBASIC9.24□□□□□ -0.93
LMO3Q8TAP4 AC011294.1-202ENST00000451905 1947 ntTSL 2 BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 LIMK2-201ENST00000331728 3670 ntAPPRIS P4 TSL 1 (best) BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 LINC01133-203ENST00000635112 1996 ntTSL 5 BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 CALML4-208ENST00000540479 4603 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 SERPINB6-205ENST00000380539 1338 ntAPPRIS P1 TSL 3 BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 SEPT4-202ENST00000317268 1784 ntAPPRIS P4 TSL 1 (best) BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 AC009044.1-201ENST00000624577 1798 ntBASIC9.24□□□□□ -0.93
LMO3Q8TAP4 GC-208ENST00000513476 1567 ntTSL 5 BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 FAM13C-215ENST00000614220 3388 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 ELF4-202ENST00000335997 4145 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 MAP3K8-202ENST00000375321 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LMO3Q8TAP4 CMKLR1-202ENST00000412676 5110 ntAPPRIS ALT2 TSL 3 BASIC9.23□□□□□ -0.93
LMO3Q8TAP4 ZEB2-245ENST00000638087 9339 ntTSL 5 BASIC9.23□□□□□ -0.93
LMO3Q8TAP4 WDPCP-206ENST00000409562 3544 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
LMO3Q8TAP4 ZSCAN26-202ENST00000421553 2835 ntAPPRIS ALT1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LMO3Q8TAP4 CYFIP2-209ENST00000521420 6370 ntTSL 2 BASIC9.23□□□□□ -0.93
LMO3Q8TAP4 COL4A6-210ENST00000621266 6627 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
LMO3Q8TAP4 THSD7B-201ENST00000272643 5939 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
LMO3Q8TAP4 ARHGEF11-202ENST00000368194 6889 ntAPPRIS P4 TSL 1 (best) BASIC9.23□□□□□ -0.93
LMO3Q8TAP4 SORL1-204ENST00000525532 3836 ntTSL 2 BASIC9.23□□□□□ -0.93
LMO3Q8TAP4 CYP2C19-201ENST00000371321 1901 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LMO3Q8TAP4 FLT1-203ENST00000540678 1927 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
LMO3Q8TAP4 ALOXE3-202ENST00000380149 3362 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
LMO3Q8TAP4 ZNF322-208ENST00000622479 4882 ntAPPRIS P1 TSL 4 BASIC9.23□□□□□ -0.93
LMO3Q8TAP4 ITGB6-201ENST00000283249 4675 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LMO3Q8TAP4 RRM2-201ENST00000304567 3271 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LMO3Q8TAP4 AC044810.2-202ENST00000527847 2503 ntTSL 2 BASIC9.23□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms