Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
BIVM-ERCC5R4GMW8 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
BIVM-ERCC5R4GMW8 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC34.38■■■■□ 3.09
BIVM-ERCC5R4GMW8 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
BIVM-ERCC5R4GMW8 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC34.38■■■■□ 3.09
BIVM-ERCC5R4GMW8 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC34.37■■■■□ 3.09
BIVM-ERCC5R4GMW8 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC34.37■■■■□ 3.09
BIVM-ERCC5R4GMW8 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC34.37■■■■□ 3.09
BIVM-ERCC5R4GMW8 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
BIVM-ERCC5R4GMW8 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
BIVM-ERCC5R4GMW8 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
BIVM-ERCC5R4GMW8 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC34.37■■■■□ 3.09
BIVM-ERCC5R4GMW8 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
BIVM-ERCC5R4GMW8 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC34.37■■■■□ 3.09
BIVM-ERCC5R4GMW8 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
BIVM-ERCC5R4GMW8 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC34.37■■■■□ 3.09
BIVM-ERCC5R4GMW8 PPOX-219ENST00000544598 813 ntTSL 2 BASIC34.37■■■■□ 3.09
BIVM-ERCC5R4GMW8 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
BIVM-ERCC5R4GMW8 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC34.36■■■■□ 3.09
BIVM-ERCC5R4GMW8 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC34.36■■■■□ 3.09
BIVM-ERCC5R4GMW8 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC34.36■■■■□ 3.09
BIVM-ERCC5R4GMW8 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC34.36■■■■□ 3.09
BIVM-ERCC5R4GMW8 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
BIVM-ERCC5R4GMW8 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC34.35■■■■□ 3.09
BIVM-ERCC5R4GMW8 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC34.35■■■■□ 3.09
BIVM-ERCC5R4GMW8 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC34.35■■■■□ 3.09
BIVM-ERCC5R4GMW8 AC010331.1-201ENST00000611423 582 ntBASIC34.35■■■■□ 3.09
BIVM-ERCC5R4GMW8 CABP2-204ENST00000636477 941 ntTSL 5 BASIC34.35■■■■□ 3.09
BIVM-ERCC5R4GMW8 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC34.35■■■■□ 3.09
BIVM-ERCC5R4GMW8 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC34.35■■■■□ 3.09
BIVM-ERCC5R4GMW8 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC34.35■■■■□ 3.09
BIVM-ERCC5R4GMW8 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
BIVM-ERCC5R4GMW8 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC34.34■■■■□ 3.09
BIVM-ERCC5R4GMW8 AC097493.4-201ENST00000641197 219 ntBASIC34.34■■■■□ 3.09
BIVM-ERCC5R4GMW8 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC34.34■■■■□ 3.09
BIVM-ERCC5R4GMW8 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC34.34■■■■□ 3.09
BIVM-ERCC5R4GMW8 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC34.34■■■■□ 3.09
BIVM-ERCC5R4GMW8 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
BIVM-ERCC5R4GMW8 ECEL1P1-201ENST00000373592 1742 ntBASIC34.34■■■■□ 3.09
BIVM-ERCC5R4GMW8 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC34.34■■■■□ 3.09
BIVM-ERCC5R4GMW8 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC34.34■■■■□ 3.09
BIVM-ERCC5R4GMW8 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
BIVM-ERCC5R4GMW8 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC34.34■■■■□ 3.09
BIVM-ERCC5R4GMW8 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
BIVM-ERCC5R4GMW8 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
BIVM-ERCC5R4GMW8 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC34.33■■■■□ 3.09
BIVM-ERCC5R4GMW8 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
BIVM-ERCC5R4GMW8 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
BIVM-ERCC5R4GMW8 RCN1P1-201ENST00000400413 996 ntBASIC34.33■■■■□ 3.09
BIVM-ERCC5R4GMW8 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC34.33■■■■□ 3.09
BIVM-ERCC5R4GMW8 PRKY-204ENST00000533551 1019 ntBASIC34.33■■■■□ 3.09
BIVM-ERCC5R4GMW8 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC34.33■■■■□ 3.09
BIVM-ERCC5R4GMW8 AL121829.2-201ENST00000620908 328 ntBASIC34.33■■■■□ 3.09
BIVM-ERCC5R4GMW8 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC34.33■■■■□ 3.09
BIVM-ERCC5R4GMW8 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC34.32■■■■□ 3.08
BIVM-ERCC5R4GMW8 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC34.32■■■■□ 3.08
BIVM-ERCC5R4GMW8 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
BIVM-ERCC5R4GMW8 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
BIVM-ERCC5R4GMW8 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
BIVM-ERCC5R4GMW8 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC34.31■■■■□ 3.08
BIVM-ERCC5R4GMW8 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC34.31■■■■□ 3.08
BIVM-ERCC5R4GMW8 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
BIVM-ERCC5R4GMW8 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
BIVM-ERCC5R4GMW8 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
BIVM-ERCC5R4GMW8 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
BIVM-ERCC5R4GMW8 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
BIVM-ERCC5R4GMW8 TREX2-204ENST00000370212 861 ntTSL 5 BASIC34.31■■■■□ 3.08
BIVM-ERCC5R4GMW8 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC34.31■■■■□ 3.08
BIVM-ERCC5R4GMW8 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC34.31■■■■□ 3.08
BIVM-ERCC5R4GMW8 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC34.31■■■■□ 3.08
BIVM-ERCC5R4GMW8 AL390719.1-204ENST00000412397 1219 ntBASIC34.31■■■■□ 3.08
BIVM-ERCC5R4GMW8 MIR2861-201ENST00000636310 90 ntBASIC34.31■■■■□ 3.08
BIVM-ERCC5R4GMW8 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC34.31■■■■□ 3.08
BIVM-ERCC5R4GMW8 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC34.31■■■■□ 3.08
BIVM-ERCC5R4GMW8 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC34.31■■■■□ 3.08
BIVM-ERCC5R4GMW8 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
BIVM-ERCC5R4GMW8 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC34.31■■■■□ 3.08
BIVM-ERCC5R4GMW8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC34.31■■■■□ 3.08
BIVM-ERCC5R4GMW8 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC34.3■■■■□ 3.08
BIVM-ERCC5R4GMW8 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC34.3■■■■□ 3.08
BIVM-ERCC5R4GMW8 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC34.3■■■■□ 3.08
BIVM-ERCC5R4GMW8 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC34.3■■■■□ 3.08
BIVM-ERCC5R4GMW8 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC34.3■■■■□ 3.08
BIVM-ERCC5R4GMW8 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC34.3■■■■□ 3.08
BIVM-ERCC5R4GMW8 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC34.3■■■■□ 3.08
BIVM-ERCC5R4GMW8 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC34.3■■■■□ 3.08
BIVM-ERCC5R4GMW8 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
BIVM-ERCC5R4GMW8 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
BIVM-ERCC5R4GMW8 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
BIVM-ERCC5R4GMW8 KRT17P2-201ENST00000300992 1314 ntBASIC34.3■■■■□ 3.08
BIVM-ERCC5R4GMW8 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC34.3■■■■□ 3.08
BIVM-ERCC5R4GMW8 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC34.3■■■■□ 3.08
BIVM-ERCC5R4GMW8 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
BIVM-ERCC5R4GMW8 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC34.3■■■■□ 3.08
BIVM-ERCC5R4GMW8 AP001412.1-201ENST00000608405 714 ntBASIC34.3■■■■□ 3.08
BIVM-ERCC5R4GMW8 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC34.29■■■■□ 3.08
BIVM-ERCC5R4GMW8 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
BIVM-ERCC5R4GMW8 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC34.29■■■■□ 3.08
BIVM-ERCC5R4GMW8 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC34.29■■■■□ 3.08
BIVM-ERCC5R4GMW8 TERT-206ENST00000508104 2486 ntTSL 5 BASIC34.29■■■■□ 3.08
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms