Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HCFC2Q9Y5Z7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HCFC2Q9Y5Z7 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HCFC2Q9Y5Z7 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.5■■□□□ 1.03
HCFC2Q9Y5Z7 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
HCFC2Q9Y5Z7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.5■■□□□ 1.03
HCFC2Q9Y5Z7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.5■■□□□ 1.03
HCFC2Q9Y5Z7 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.5■■□□□ 1.03
HCFC2Q9Y5Z7 AC012306.2-201ENST00000609350 630 ntBASIC21.5■■□□□ 1.03
HCFC2Q9Y5Z7 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.5■■□□□ 1.03
HCFC2Q9Y5Z7 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.5■■□□□ 1.03
HCFC2Q9Y5Z7 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HCFC2Q9Y5Z7 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.5■■□□□ 1.03
HCFC2Q9Y5Z7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
HCFC2Q9Y5Z7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HCFC2Q9Y5Z7 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
HCFC2Q9Y5Z7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
HCFC2Q9Y5Z7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
HCFC2Q9Y5Z7 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
HCFC2Q9Y5Z7 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.49■■□□□ 1.03
HCFC2Q9Y5Z7 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.49■■□□□ 1.03
HCFC2Q9Y5Z7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HCFC2Q9Y5Z7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
HCFC2Q9Y5Z7 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HCFC2Q9Y5Z7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
HCFC2Q9Y5Z7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.49■■□□□ 1.03
HCFC2Q9Y5Z7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HCFC2Q9Y5Z7 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HCFC2Q9Y5Z7 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HCFC2Q9Y5Z7 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HCFC2Q9Y5Z7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HCFC2Q9Y5Z7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HCFC2Q9Y5Z7 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HCFC2Q9Y5Z7 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
HCFC2Q9Y5Z7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HCFC2Q9Y5Z7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
HCFC2Q9Y5Z7 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.48■■□□□ 1.03
HCFC2Q9Y5Z7 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HCFC2Q9Y5Z7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HCFC2Q9Y5Z7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.48■■□□□ 1.03
HCFC2Q9Y5Z7 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
HCFC2Q9Y5Z7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
HCFC2Q9Y5Z7 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HCFC2Q9Y5Z7 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.48■■□□□ 1.03
HCFC2Q9Y5Z7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
HCFC2Q9Y5Z7 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HCFC2Q9Y5Z7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.47■■□□□ 1.03
HCFC2Q9Y5Z7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HCFC2Q9Y5Z7 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HCFC2Q9Y5Z7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
HCFC2Q9Y5Z7 RCN1P1-201ENST00000400413 996 ntBASIC21.47■■□□□ 1.03
HCFC2Q9Y5Z7 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HCFC2Q9Y5Z7 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.47■■□□□ 1.03
HCFC2Q9Y5Z7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HCFC2Q9Y5Z7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.47■■□□□ 1.03
HCFC2Q9Y5Z7 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
HCFC2Q9Y5Z7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HCFC2Q9Y5Z7 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
HCFC2Q9Y5Z7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.47■■□□□ 1.03
HCFC2Q9Y5Z7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HCFC2Q9Y5Z7 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HCFC2Q9Y5Z7 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
HCFC2Q9Y5Z7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HCFC2Q9Y5Z7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.46■■□□□ 1.03
HCFC2Q9Y5Z7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HCFC2Q9Y5Z7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
HCFC2Q9Y5Z7 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.46■■□□□ 1.03
HCFC2Q9Y5Z7 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.46■■□□□ 1.03
HCFC2Q9Y5Z7 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.46■■□□□ 1.03
HCFC2Q9Y5Z7 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.46■■□□□ 1.03
HCFC2Q9Y5Z7 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
HCFC2Q9Y5Z7 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HCFC2Q9Y5Z7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HCFC2Q9Y5Z7 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
HCFC2Q9Y5Z7 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
HCFC2Q9Y5Z7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HCFC2Q9Y5Z7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HCFC2Q9Y5Z7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
HCFC2Q9Y5Z7 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
HCFC2Q9Y5Z7 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
HCFC2Q9Y5Z7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HCFC2Q9Y5Z7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
HCFC2Q9Y5Z7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.45■■□□□ 1.02
HCFC2Q9Y5Z7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
HCFC2Q9Y5Z7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
HCFC2Q9Y5Z7 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.45■■□□□ 1.02
HCFC2Q9Y5Z7 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
HCFC2Q9Y5Z7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.45■■□□□ 1.02
HCFC2Q9Y5Z7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.45■■□□□ 1.02
HCFC2Q9Y5Z7 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
HCFC2Q9Y5Z7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.45■■□□□ 1.02
HCFC2Q9Y5Z7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.45■■□□□ 1.02
HCFC2Q9Y5Z7 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HCFC2Q9Y5Z7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HCFC2Q9Y5Z7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
HCFC2Q9Y5Z7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HCFC2Q9Y5Z7 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
HCFC2Q9Y5Z7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
HCFC2Q9Y5Z7 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HCFC2Q9Y5Z7 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms