Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGB3Q9Y5G1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGB3Q9Y5G1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGB3Q9Y5G1 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGB3Q9Y5G1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PCDHGB3Q9Y5G1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
PCDHGB3Q9Y5G1 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGB3Q9Y5G1 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PCDHGB3Q9Y5G1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.32■□□□□ 0.68
PCDHGB3Q9Y5G1 AP001160.3-201ENST00000601484 763 ntBASIC19.32■□□□□ 0.68
PCDHGB3Q9Y5G1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGB3Q9Y5G1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGB3Q9Y5G1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGB3Q9Y5G1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGB3Q9Y5G1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDHGB3Q9Y5G1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDHGB3Q9Y5G1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PCDHGB3Q9Y5G1 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDHGB3Q9Y5G1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGB3Q9Y5G1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGB3Q9Y5G1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGB3Q9Y5G1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGB3Q9Y5G1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGB3Q9Y5G1 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.31■□□□□ 0.68
PCDHGB3Q9Y5G1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGB3Q9Y5G1 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGB3Q9Y5G1 AC245052.3-201ENST00000450182 901 ntBASIC19.31■□□□□ 0.68
PCDHGB3Q9Y5G1 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGB3Q9Y5G1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDHGB3Q9Y5G1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDHGB3Q9Y5G1 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDHGB3Q9Y5G1 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PCDHGB3Q9Y5G1 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PCDHGB3Q9Y5G1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PCDHGB3Q9Y5G1 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGB3Q9Y5G1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PCDHGB3Q9Y5G1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PCDHGB3Q9Y5G1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGB3Q9Y5G1 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGB3Q9Y5G1 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDHGB3Q9Y5G1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
PCDHGB3Q9Y5G1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGB3Q9Y5G1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.3■□□□□ 0.68
PCDHGB3Q9Y5G1 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGB3Q9Y5G1 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGB3Q9Y5G1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGB3Q9Y5G1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHGB3Q9Y5G1 AC080038.1-201ENST00000611274 1154 ntBASIC19.3■□□□□ 0.68
PCDHGB3Q9Y5G1 BID-214ENST00000617586 542 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDHGB3Q9Y5G1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGB3Q9Y5G1 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.3■□□□□ 0.68
PCDHGB3Q9Y5G1 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGB3Q9Y5G1 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGB3Q9Y5G1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGB3Q9Y5G1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHGB3Q9Y5G1 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGB3Q9Y5G1 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGB3Q9Y5G1 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGB3Q9Y5G1 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
PCDHGB3Q9Y5G1 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGB3Q9Y5G1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGB3Q9Y5G1 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGB3Q9Y5G1 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDHGB3Q9Y5G1 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGB3Q9Y5G1 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDHGB3Q9Y5G1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGB3Q9Y5G1 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHGB3Q9Y5G1 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDHGB3Q9Y5G1 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDHGB3Q9Y5G1 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.29■□□□□ 0.68
PCDHGB3Q9Y5G1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGB3Q9Y5G1 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGB3Q9Y5G1 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PCDHGB3Q9Y5G1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGB3Q9Y5G1 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
PCDHGB3Q9Y5G1 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
PCDHGB3Q9Y5G1 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGB3Q9Y5G1 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGB3Q9Y5G1 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
PCDHGB3Q9Y5G1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
PCDHGB3Q9Y5G1 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHGB3Q9Y5G1 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGB3Q9Y5G1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGB3Q9Y5G1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGB3Q9Y5G1 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
PCDHGB3Q9Y5G1 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGB3Q9Y5G1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGB3Q9Y5G1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.28■□□□□ 0.68
PCDHGB3Q9Y5G1 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHGB3Q9Y5G1 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHGB3Q9Y5G1 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.28■□□□□ 0.68
PCDHGB3Q9Y5G1 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGB3Q9Y5G1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGB3Q9Y5G1 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PCDHGB3Q9Y5G1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGB3Q9Y5G1 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHGB3Q9Y5G1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
PCDHGB3Q9Y5G1 AC007225.1-201ENST00000566331 1836 ntBASIC19.28■□□□□ 0.68
PCDHGB3Q9Y5G1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGB3Q9Y5G1 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms