Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGC4Q9Y5F7 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
PCDHGC4Q9Y5F7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PCDHGC4Q9Y5F7 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGC4Q9Y5F7 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGC4Q9Y5F7 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGC4Q9Y5F7 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDHGC4Q9Y5F7 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGC4Q9Y5F7 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGC4Q9Y5F7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGC4Q9Y5F7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHGC4Q9Y5F7 AC007225.1-201ENST00000566331 1836 ntBASIC20.62■□□□□ 0.89
PCDHGC4Q9Y5F7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGC4Q9Y5F7 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGC4Q9Y5F7 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGC4Q9Y5F7 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHGC4Q9Y5F7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.62■□□□□ 0.89
PCDHGC4Q9Y5F7 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGC4Q9Y5F7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PCDHGC4Q9Y5F7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHGC4Q9Y5F7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
PCDHGC4Q9Y5F7 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.62■□□□□ 0.89
PCDHGC4Q9Y5F7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDHGC4Q9Y5F7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGC4Q9Y5F7 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.62■□□□□ 0.89
PCDHGC4Q9Y5F7 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGC4Q9Y5F7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGC4Q9Y5F7 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGC4Q9Y5F7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGC4Q9Y5F7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGC4Q9Y5F7 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHGC4Q9Y5F7 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGC4Q9Y5F7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGC4Q9Y5F7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGC4Q9Y5F7 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
PCDHGC4Q9Y5F7 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGC4Q9Y5F7 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
PCDHGC4Q9Y5F7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PCDHGC4Q9Y5F7 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGC4Q9Y5F7 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHGC4Q9Y5F7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGC4Q9Y5F7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGC4Q9Y5F7 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGC4Q9Y5F7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGC4Q9Y5F7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGC4Q9Y5F7 LSM12P1-201ENST00000411836 588 ntBASIC20.61■□□□□ 0.89
PCDHGC4Q9Y5F7 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.61■□□□□ 0.89
PCDHGC4Q9Y5F7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDHGC4Q9Y5F7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGC4Q9Y5F7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGC4Q9Y5F7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PCDHGC4Q9Y5F7 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHGC4Q9Y5F7 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGC4Q9Y5F7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGC4Q9Y5F7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGC4Q9Y5F7 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDHGC4Q9Y5F7 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDHGC4Q9Y5F7 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDHGC4Q9Y5F7 AL356652.1-201ENST00000615962 565 ntBASIC20.6■□□□□ 0.89
PCDHGC4Q9Y5F7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PCDHGC4Q9Y5F7 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGC4Q9Y5F7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGC4Q9Y5F7 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGC4Q9Y5F7 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGC4Q9Y5F7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PCDHGC4Q9Y5F7 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGC4Q9Y5F7 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PCDHGC4Q9Y5F7 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGC4Q9Y5F7 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGC4Q9Y5F7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PCDHGC4Q9Y5F7 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PCDHGC4Q9Y5F7 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDHGC4Q9Y5F7 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGC4Q9Y5F7 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGC4Q9Y5F7 AC098934.4-201ENST00000564127 592 ntBASIC20.59■□□□□ 0.89
PCDHGC4Q9Y5F7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHGC4Q9Y5F7 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDHGC4Q9Y5F7 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGC4Q9Y5F7 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PCDHGC4Q9Y5F7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.59■□□□□ 0.89
PCDHGC4Q9Y5F7 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHGC4Q9Y5F7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDHGC4Q9Y5F7 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGC4Q9Y5F7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHGC4Q9Y5F7 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGC4Q9Y5F7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGC4Q9Y5F7 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGC4Q9Y5F7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGC4Q9Y5F7 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
PCDHGC4Q9Y5F7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGC4Q9Y5F7 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.58■□□□□ 0.89
PCDHGC4Q9Y5F7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.58■□□□□ 0.89
PCDHGC4Q9Y5F7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
PCDHGC4Q9Y5F7 PGM5P4-201ENST00000421970 445 ntBASIC20.58■□□□□ 0.89
PCDHGC4Q9Y5F7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGC4Q9Y5F7 AC142086.2-201ENST00000569753 217 ntBASIC20.58■□□□□ 0.89
PCDHGC4Q9Y5F7 AL589743.5-201ENST00000616611 1050 ntBASIC20.58■□□□□ 0.89
PCDHGC4Q9Y5F7 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGC4Q9Y5F7 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGC4Q9Y5F7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms