Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.39■□□□□ 0.85
PCDHB1Q9Y5F3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
PCDHB1Q9Y5F3 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.39■□□□□ 0.85
PCDHB1Q9Y5F3 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.39■□□□□ 0.85
PCDHB1Q9Y5F3 AC007322.4-201ENST00000509611 723 ntBASIC20.39■□□□□ 0.85
PCDHB1Q9Y5F3 AC092118.2-201ENST00000613495 667 ntBASIC20.39■□□□□ 0.85
PCDHB1Q9Y5F3 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
PCDHB1Q9Y5F3 OR10C1-204ENST00000622521 1039 ntBASIC20.39■□□□□ 0.85
PCDHB1Q9Y5F3 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.39■□□□□ 0.85
PCDHB1Q9Y5F3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHB1Q9Y5F3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.39■□□□□ 0.85
PCDHB1Q9Y5F3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHB1Q9Y5F3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHB1Q9Y5F3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHB1Q9Y5F3 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
PCDHB1Q9Y5F3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHB1Q9Y5F3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHB1Q9Y5F3 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHB1Q9Y5F3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHB1Q9Y5F3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHB1Q9Y5F3 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHB1Q9Y5F3 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHB1Q9Y5F3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.38■□□□□ 0.85
PCDHB1Q9Y5F3 AC098590.1-201ENST00000468126 897 ntBASIC20.38■□□□□ 0.85
PCDHB1Q9Y5F3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHB1Q9Y5F3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.38■□□□□ 0.85
PCDHB1Q9Y5F3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.38■□□□□ 0.85
PCDHB1Q9Y5F3 AC008694.1-202ENST00000636953 945 ntBASIC20.38■□□□□ 0.85
PCDHB1Q9Y5F3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHB1Q9Y5F3 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHB1Q9Y5F3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHB1Q9Y5F3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHB1Q9Y5F3 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHB1Q9Y5F3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHB1Q9Y5F3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHB1Q9Y5F3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHB1Q9Y5F3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDHB1Q9Y5F3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
PCDHB1Q9Y5F3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PCDHB1Q9Y5F3 AC007225.1-201ENST00000566331 1836 ntBASIC20.37■□□□□ 0.85
PCDHB1Q9Y5F3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDHB1Q9Y5F3 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.37■□□□□ 0.85
PCDHB1Q9Y5F3 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHB1Q9Y5F3 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PCDHB1Q9Y5F3 BX276092.2-201ENST00000417668 665 ntBASIC20.37■□□□□ 0.85
PCDHB1Q9Y5F3 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
PCDHB1Q9Y5F3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHB1Q9Y5F3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDHB1Q9Y5F3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
PCDHB1Q9Y5F3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
PCDHB1Q9Y5F3 AC083880.1-201ENST00000608266 535 ntBASIC20.37■□□□□ 0.85
PCDHB1Q9Y5F3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHB1Q9Y5F3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHB1Q9Y5F3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHB1Q9Y5F3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHB1Q9Y5F3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHB1Q9Y5F3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDHB1Q9Y5F3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDHB1Q9Y5F3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.37■□□□□ 0.85
PCDHB1Q9Y5F3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDHB1Q9Y5F3 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHB1Q9Y5F3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PCDHB1Q9Y5F3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB1Q9Y5F3 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB1Q9Y5F3 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PCDHB1Q9Y5F3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB1Q9Y5F3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB1Q9Y5F3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.36■□□□□ 0.85
PCDHB1Q9Y5F3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.36■□□□□ 0.85
PCDHB1Q9Y5F3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.36■□□□□ 0.85
PCDHB1Q9Y5F3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB1Q9Y5F3 AC007322.3-201ENST00000426526 701 ntBASIC20.36■□□□□ 0.85
PCDHB1Q9Y5F3 DUSP5P2-201ENST00000426873 1033 ntBASIC20.36■□□□□ 0.85
PCDHB1Q9Y5F3 CDV3P1-201ENST00000471403 739 ntBASIC20.36■□□□□ 0.85
PCDHB1Q9Y5F3 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHB1Q9Y5F3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PCDHB1Q9Y5F3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
PCDHB1Q9Y5F3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.36■□□□□ 0.85
PCDHB1Q9Y5F3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.36■□□□□ 0.85
PCDHB1Q9Y5F3 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.36■□□□□ 0.85
PCDHB1Q9Y5F3 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.36■□□□□ 0.85
PCDHB1Q9Y5F3 AC069236.1-201ENST00000604339 616 ntBASIC20.36■□□□□ 0.85
PCDHB1Q9Y5F3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.36■□□□□ 0.85
PCDHB1Q9Y5F3 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
PCDHB1Q9Y5F3 AC027702.1-201ENST00000563810 1770 ntBASIC20.36■□□□□ 0.85
PCDHB1Q9Y5F3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHB1Q9Y5F3 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB1Q9Y5F3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB1Q9Y5F3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB1Q9Y5F3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB1Q9Y5F3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
PCDHB1Q9Y5F3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB1Q9Y5F3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB1Q9Y5F3 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PCDHB1Q9Y5F3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB1Q9Y5F3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
PCDHB1Q9Y5F3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB1Q9Y5F3 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHB1Q9Y5F3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.35■□□□□ 0.85
PCDHB1Q9Y5F3 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 176 ms