Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDHB9Q9Y5E1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDHB9Q9Y5E1 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHB9Q9Y5E1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
PCDHB9Q9Y5E1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
PCDHB9Q9Y5E1 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.72■□□□□ 0.91
PCDHB9Q9Y5E1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDHB9Q9Y5E1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
PCDHB9Q9Y5E1 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHB9Q9Y5E1 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHB9Q9Y5E1 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHB9Q9Y5E1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHB9Q9Y5E1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHB9Q9Y5E1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDHB9Q9Y5E1 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHB9Q9Y5E1 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHB9Q9Y5E1 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.71■□□□□ 0.91
PCDHB9Q9Y5E1 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PCDHB9Q9Y5E1 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.71■□□□□ 0.91
PCDHB9Q9Y5E1 AL596275.1-201ENST00000423464 877 ntBASIC20.71■□□□□ 0.91
PCDHB9Q9Y5E1 AC083880.1-201ENST00000608266 535 ntBASIC20.71■□□□□ 0.91
PCDHB9Q9Y5E1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHB9Q9Y5E1 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
PCDHB9Q9Y5E1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PCDHB9Q9Y5E1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHB9Q9Y5E1 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDHB9Q9Y5E1 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PCDHB9Q9Y5E1 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHB9Q9Y5E1 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHB9Q9Y5E1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.71■□□□□ 0.91
PCDHB9Q9Y5E1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDHB9Q9Y5E1 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
PCDHB9Q9Y5E1 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHB9Q9Y5E1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHB9Q9Y5E1 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHB9Q9Y5E1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHB9Q9Y5E1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
PCDHB9Q9Y5E1 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHB9Q9Y5E1 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDHB9Q9Y5E1 AC128676.1-201ENST00000454392 318 ntBASIC20.7■□□□□ 0.9
PCDHB9Q9Y5E1 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.7■□□□□ 0.9
PCDHB9Q9Y5E1 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.7■□□□□ 0.9
PCDHB9Q9Y5E1 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.7■□□□□ 0.9
PCDHB9Q9Y5E1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDHB9Q9Y5E1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHB9Q9Y5E1 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.7■□□□□ 0.9
PCDHB9Q9Y5E1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.7■□□□□ 0.9
PCDHB9Q9Y5E1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHB9Q9Y5E1 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDHB9Q9Y5E1 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.7■□□□□ 0.9
PCDHB9Q9Y5E1 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHB9Q9Y5E1 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHB9Q9Y5E1 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
PCDHB9Q9Y5E1 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHB9Q9Y5E1 AC010980.2-201ENST00000587099 1412 ntBASIC20.7■□□□□ 0.9
PCDHB9Q9Y5E1 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHB9Q9Y5E1 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHB9Q9Y5E1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
PCDHB9Q9Y5E1 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHB9Q9Y5E1 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHB9Q9Y5E1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDHB9Q9Y5E1 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHB9Q9Y5E1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHB9Q9Y5E1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHB9Q9Y5E1 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHB9Q9Y5E1 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
PCDHB9Q9Y5E1 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHB9Q9Y5E1 UNC93B4-201ENST00000505679 747 ntBASIC20.69■□□□□ 0.9
PCDHB9Q9Y5E1 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDHB9Q9Y5E1 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHB9Q9Y5E1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHB9Q9Y5E1 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDHB9Q9Y5E1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHB9Q9Y5E1 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDHB9Q9Y5E1 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHB9Q9Y5E1 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDHB9Q9Y5E1 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHB9Q9Y5E1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHB9Q9Y5E1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHB9Q9Y5E1 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
PCDHB9Q9Y5E1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.68■□□□□ 0.9
PCDHB9Q9Y5E1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB9Q9Y5E1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.68■□□□□ 0.9
PCDHB9Q9Y5E1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB9Q9Y5E1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.68■□□□□ 0.9
PCDHB9Q9Y5E1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB9Q9Y5E1 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PCDHB9Q9Y5E1 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.68■□□□□ 0.9
PCDHB9Q9Y5E1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB9Q9Y5E1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB9Q9Y5E1 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
PCDHB9Q9Y5E1 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDHB9Q9Y5E1 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB9Q9Y5E1 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB9Q9Y5E1 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB9Q9Y5E1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB9Q9Y5E1 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
PCDHB9Q9Y5E1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PCDHB9Q9Y5E1 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB9Q9Y5E1 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms