Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LSM2Q9Y333 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LSM2Q9Y333 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
LSM2Q9Y333 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
LSM2Q9Y333 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.14■□□□□ 0.49
LSM2Q9Y333 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
LSM2Q9Y333 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
LSM2Q9Y333 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSM2Q9Y333 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
LSM2Q9Y333 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSM2Q9Y333 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LSM2Q9Y333 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSM2Q9Y333 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
LSM2Q9Y333 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.13■□□□□ 0.49
LSM2Q9Y333 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSM2Q9Y333 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSM2Q9Y333 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSM2Q9Y333 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
LSM2Q9Y333 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSM2Q9Y333 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.13■□□□□ 0.49
LSM2Q9Y333 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.13■□□□□ 0.49
LSM2Q9Y333 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSM2Q9Y333 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSM2Q9Y333 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
LSM2Q9Y333 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.13■□□□□ 0.49
LSM2Q9Y333 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSM2Q9Y333 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSM2Q9Y333 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSM2Q9Y333 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSM2Q9Y333 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSM2Q9Y333 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.13■□□□□ 0.49
LSM2Q9Y333 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.13■□□□□ 0.49
LSM2Q9Y333 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LSM2Q9Y333 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LSM2Q9Y333 TREX1-205ENST00000625293 1783 ntBASIC18.12■□□□□ 0.49
LSM2Q9Y333 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LSM2Q9Y333 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
LSM2Q9Y333 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LSM2Q9Y333 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LSM2Q9Y333 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LSM2Q9Y333 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LSM2Q9Y333 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
LSM2Q9Y333 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LSM2Q9Y333 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
LSM2Q9Y333 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.12■□□□□ 0.49
LSM2Q9Y333 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
LSM2Q9Y333 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LSM2Q9Y333 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LSM2Q9Y333 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LSM2Q9Y333 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LSM2Q9Y333 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LSM2Q9Y333 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
LSM2Q9Y333 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.12■□□□□ 0.49
LSM2Q9Y333 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LSM2Q9Y333 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LSM2Q9Y333 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
LSM2Q9Y333 AL691432.2-201ENST00000607222 2038 ntBASIC18.11■□□□□ 0.49
LSM2Q9Y333 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LSM2Q9Y333 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LSM2Q9Y333 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LSM2Q9Y333 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.11■□□□□ 0.49
LSM2Q9Y333 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.11■□□□□ 0.49
LSM2Q9Y333 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LSM2Q9Y333 DUX4L19-201ENST00000557448 1267 ntBASIC18.11■□□□□ 0.49
LSM2Q9Y333 EEF1DP3-203ENST00000566025 782 ntBASIC18.11■□□□□ 0.49
LSM2Q9Y333 MIR2861-201ENST00000636310 90 ntBASIC18.11■□□□□ 0.49
LSM2Q9Y333 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LSM2Q9Y333 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
LSM2Q9Y333 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LSM2Q9Y333 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LSM2Q9Y333 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.11■□□□□ 0.49
LSM2Q9Y333 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
LSM2Q9Y333 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.11■□□□□ 0.49
LSM2Q9Y333 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LSM2Q9Y333 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.11■□□□□ 0.49
LSM2Q9Y333 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LSM2Q9Y333 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.11■□□□□ 0.49
LSM2Q9Y333 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.11■□□□□ 0.49
LSM2Q9Y333 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LSM2Q9Y333 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LSM2Q9Y333 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LSM2Q9Y333 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.11■□□□□ 0.49
LSM2Q9Y333 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LSM2Q9Y333 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LSM2Q9Y333 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LSM2Q9Y333 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.1■□□□□ 0.49
LSM2Q9Y333 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LSM2Q9Y333 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.1■□□□□ 0.49
LSM2Q9Y333 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.1■□□□□ 0.49
LSM2Q9Y333 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LSM2Q9Y333 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.1■□□□□ 0.49
LSM2Q9Y333 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
LSM2Q9Y333 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.1■□□□□ 0.49
LSM2Q9Y333 RARRES2P1-201ENST00000474487 481 ntBASIC18.1■□□□□ 0.49
LSM2Q9Y333 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.1■□□□□ 0.49
LSM2Q9Y333 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LSM2Q9Y333 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LSM2Q9Y333 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LSM2Q9Y333 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LSM2Q9Y333 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms