Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.69■□□□□ 0.74
SPHK1Q9NYA1 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.69■□□□□ 0.74
SPHK1Q9NYA1 AC097658.1-201ENST00000475555 843 ntBASIC19.69■□□□□ 0.74
SPHK1Q9NYA1 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SPHK1Q9NYA1 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
SPHK1Q9NYA1 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SPHK1Q9NYA1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.69■□□□□ 0.74
SPHK1Q9NYA1 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
SPHK1Q9NYA1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SPHK1Q9NYA1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SPHK1Q9NYA1 AL121603.2-201ENST00000557373 2117 ntBASIC19.69■□□□□ 0.74
SPHK1Q9NYA1 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.69■□□□□ 0.74
SPHK1Q9NYA1 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SPHK1Q9NYA1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPHK1Q9NYA1 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPHK1Q9NYA1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPHK1Q9NYA1 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.68■□□□□ 0.74
SPHK1Q9NYA1 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPHK1Q9NYA1 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPHK1Q9NYA1 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPHK1Q9NYA1 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPHK1Q9NYA1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.68■□□□□ 0.74
SPHK1Q9NYA1 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.68■□□□□ 0.74
SPHK1Q9NYA1 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPHK1Q9NYA1 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.68■□□□□ 0.74
SPHK1Q9NYA1 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.68■□□□□ 0.74
SPHK1Q9NYA1 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SPHK1Q9NYA1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.68■□□□□ 0.74
SPHK1Q9NYA1 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SPHK1Q9NYA1 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SPHK1Q9NYA1 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.68■□□□□ 0.74
SPHK1Q9NYA1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPHK1Q9NYA1 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SPHK1Q9NYA1 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SPHK1Q9NYA1 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SPHK1Q9NYA1 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.68■□□□□ 0.74
SPHK1Q9NYA1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.67■□□□□ 0.74
SPHK1Q9NYA1 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
SPHK1Q9NYA1 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SPHK1Q9NYA1 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPHK1Q9NYA1 PGM5P4-201ENST00000421970 445 ntBASIC19.67■□□□□ 0.74
SPHK1Q9NYA1 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SPHK1Q9NYA1 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.67■□□□□ 0.74
SPHK1Q9NYA1 KRT18P6-201ENST00000555540 1265 ntBASIC19.67■□□□□ 0.74
SPHK1Q9NYA1 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.67■□□□□ 0.74
SPHK1Q9NYA1 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPHK1Q9NYA1 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SPHK1Q9NYA1 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SPHK1Q9NYA1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPHK1Q9NYA1 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPHK1Q9NYA1 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SPHK1Q9NYA1 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.67■□□□□ 0.74
SPHK1Q9NYA1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.67■□□□□ 0.74
SPHK1Q9NYA1 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
SPHK1Q9NYA1 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPHK1Q9NYA1 FP700111.2-201ENST00000619190 1892 ntBASIC19.67■□□□□ 0.74
SPHK1Q9NYA1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPHK1Q9NYA1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SPHK1Q9NYA1 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SPHK1Q9NYA1 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SPHK1Q9NYA1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.66■□□□□ 0.74
SPHK1Q9NYA1 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.66■□□□□ 0.74
SPHK1Q9NYA1 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPHK1Q9NYA1 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.66■□□□□ 0.74
SPHK1Q9NYA1 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.66■□□□□ 0.74
SPHK1Q9NYA1 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SPHK1Q9NYA1 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPHK1Q9NYA1 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.66■□□□□ 0.74
SPHK1Q9NYA1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPHK1Q9NYA1 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPHK1Q9NYA1 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPHK1Q9NYA1 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SPHK1Q9NYA1 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SPHK1Q9NYA1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPHK1Q9NYA1 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.65■□□□□ 0.74
SPHK1Q9NYA1 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SPHK1Q9NYA1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SPHK1Q9NYA1 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPHK1Q9NYA1 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SPHK1Q9NYA1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.65■□□□□ 0.74
SPHK1Q9NYA1 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.65■□□□□ 0.74
SPHK1Q9NYA1 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.65■□□□□ 0.74
SPHK1Q9NYA1 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SPHK1Q9NYA1 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SPHK1Q9NYA1 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SPHK1Q9NYA1 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.65■□□□□ 0.74
SPHK1Q9NYA1 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SPHK1Q9NYA1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPHK1Q9NYA1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.65■□□□□ 0.74
SPHK1Q9NYA1 KRT8P36-201ENST00000489121 1440 ntBASIC19.65■□□□□ 0.74
SPHK1Q9NYA1 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPHK1Q9NYA1 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.65■□□□□ 0.74
SPHK1Q9NYA1 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPHK1Q9NYA1 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SPHK1Q9NYA1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPHK1Q9NYA1 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.64■□□□□ 0.74
SPHK1Q9NYA1 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.64■□□□□ 0.74
SPHK1Q9NYA1 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.64■□□□□ 0.74
SPHK1Q9NYA1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.64■□□□□ 0.74
SPHK1Q9NYA1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.64■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms