Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
MKKSQ9NPJ1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
MKKSQ9NPJ1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
MKKSQ9NPJ1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.33■□□□□ 0.68
MKKSQ9NPJ1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
MKKSQ9NPJ1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MKKSQ9NPJ1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.33■□□□□ 0.68
MKKSQ9NPJ1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MKKSQ9NPJ1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
MKKSQ9NPJ1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.32■□□□□ 0.68
MKKSQ9NPJ1 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MKKSQ9NPJ1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MKKSQ9NPJ1 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.32■□□□□ 0.68
MKKSQ9NPJ1 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.32■□□□□ 0.68
MKKSQ9NPJ1 AC087633.2-202ENST00000565166 1439 ntBASIC19.32■□□□□ 0.68
MKKSQ9NPJ1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MKKSQ9NPJ1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
MKKSQ9NPJ1 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MKKSQ9NPJ1 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
MKKSQ9NPJ1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.31■□□□□ 0.68
MKKSQ9NPJ1 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.31■□□□□ 0.68
MKKSQ9NPJ1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
MKKSQ9NPJ1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
MKKSQ9NPJ1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MKKSQ9NPJ1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MKKSQ9NPJ1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
MKKSQ9NPJ1 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.31■□□□□ 0.68
MKKSQ9NPJ1 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MKKSQ9NPJ1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.31■□□□□ 0.68
MKKSQ9NPJ1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MKKSQ9NPJ1 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MKKSQ9NPJ1 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.31■□□□□ 0.68
MKKSQ9NPJ1 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.31■□□□□ 0.68
MKKSQ9NPJ1 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.31■□□□□ 0.68
MKKSQ9NPJ1 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MKKSQ9NPJ1 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.31■□□□□ 0.68
MKKSQ9NPJ1 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.31■□□□□ 0.68
MKKSQ9NPJ1 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MKKSQ9NPJ1 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.31■□□□□ 0.68
MKKSQ9NPJ1 AC005229.4-201ENST00000610085 2198 ntBASIC19.31■□□□□ 0.68
MKKSQ9NPJ1 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
MKKSQ9NPJ1 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
MKKSQ9NPJ1 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MKKSQ9NPJ1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.31■□□□□ 0.68
MKKSQ9NPJ1 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MKKSQ9NPJ1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MKKSQ9NPJ1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
MKKSQ9NPJ1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MKKSQ9NPJ1 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MKKSQ9NPJ1 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MKKSQ9NPJ1 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.3■□□□□ 0.68
MKKSQ9NPJ1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MKKSQ9NPJ1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.3■□□□□ 0.68
MKKSQ9NPJ1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.3■□□□□ 0.68
MKKSQ9NPJ1 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
MKKSQ9NPJ1 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.3■□□□□ 0.68
MKKSQ9NPJ1 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.3■□□□□ 0.68
MKKSQ9NPJ1 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.3■□□□□ 0.68
MKKSQ9NPJ1 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.3■□□□□ 0.68
MKKSQ9NPJ1 AC083880.1-201ENST00000608266 535 ntBASIC19.3■□□□□ 0.68
MKKSQ9NPJ1 AC105020.6-201ENST00000621523 1217 ntBASIC19.3■□□□□ 0.68
MKKSQ9NPJ1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
MKKSQ9NPJ1 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MKKSQ9NPJ1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MKKSQ9NPJ1 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
MKKSQ9NPJ1 FEM1AP4-201ENST00000443167 1987 ntBASIC19.3■□□□□ 0.68
MKKSQ9NPJ1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MKKSQ9NPJ1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MKKSQ9NPJ1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MKKSQ9NPJ1 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
MKKSQ9NPJ1 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MKKSQ9NPJ1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.29■□□□□ 0.68
MKKSQ9NPJ1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.29■□□□□ 0.68
MKKSQ9NPJ1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MKKSQ9NPJ1 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MKKSQ9NPJ1 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.29■□□□□ 0.68
MKKSQ9NPJ1 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
MKKSQ9NPJ1 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
MKKSQ9NPJ1 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
MKKSQ9NPJ1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
MKKSQ9NPJ1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MKKSQ9NPJ1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
MKKSQ9NPJ1 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
MKKSQ9NPJ1 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
MKKSQ9NPJ1 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MKKSQ9NPJ1 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MKKSQ9NPJ1 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MKKSQ9NPJ1 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
MKKSQ9NPJ1 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.29■□□□□ 0.68
MKKSQ9NPJ1 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
MKKSQ9NPJ1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MKKSQ9NPJ1 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MKKSQ9NPJ1 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
MKKSQ9NPJ1 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.28■□□□□ 0.68
MKKSQ9NPJ1 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MKKSQ9NPJ1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.28■□□□□ 0.68
MKKSQ9NPJ1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.28■□□□□ 0.68
MKKSQ9NPJ1 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.28■□□□□ 0.68
MKKSQ9NPJ1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MKKSQ9NPJ1 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms