Protein–RNA interactions for Protein: Q9HBV1

POPDC3, Popeye domain-containing protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POPDC3Q9HBV1 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
POPDC3Q9HBV1 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
POPDC3Q9HBV1 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
POPDC3Q9HBV1 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
POPDC3Q9HBV1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.08■□□□□ 0.81
POPDC3Q9HBV1 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.81
POPDC3Q9HBV1 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
POPDC3Q9HBV1 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
POPDC3Q9HBV1 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
POPDC3Q9HBV1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
POPDC3Q9HBV1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
POPDC3Q9HBV1 PGM5P4-201ENST00000421970 445 ntBASIC20.08■□□□□ 0.81
POPDC3Q9HBV1 AC007322.4-201ENST00000509611 723 ntBASIC20.08■□□□□ 0.81
POPDC3Q9HBV1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
POPDC3Q9HBV1 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.08■□□□□ 0.81
POPDC3Q9HBV1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.08■□□□□ 0.81
POPDC3Q9HBV1 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
POPDC3Q9HBV1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.08■□□□□ 0.8
POPDC3Q9HBV1 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
POPDC3Q9HBV1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.08■□□□□ 0.8
POPDC3Q9HBV1 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
POPDC3Q9HBV1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
POPDC3Q9HBV1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
POPDC3Q9HBV1 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
POPDC3Q9HBV1 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
POPDC3Q9HBV1 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.07■□□□□ 0.8
POPDC3Q9HBV1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.07■□□□□ 0.8
POPDC3Q9HBV1 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
POPDC3Q9HBV1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.07■□□□□ 0.8
POPDC3Q9HBV1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
POPDC3Q9HBV1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
POPDC3Q9HBV1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
POPDC3Q9HBV1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.07■□□□□ 0.8
POPDC3Q9HBV1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.07■□□□□ 0.8
POPDC3Q9HBV1 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.07■□□□□ 0.8
POPDC3Q9HBV1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.07■□□□□ 0.8
POPDC3Q9HBV1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
POPDC3Q9HBV1 AL591742.1-201ENST00000604433 565 ntBASIC20.07■□□□□ 0.8
POPDC3Q9HBV1 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
POPDC3Q9HBV1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
POPDC3Q9HBV1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
POPDC3Q9HBV1 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.07■□□□□ 0.8
POPDC3Q9HBV1 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
POPDC3Q9HBV1 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
POPDC3Q9HBV1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
POPDC3Q9HBV1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
POPDC3Q9HBV1 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.07■□□□□ 0.8
POPDC3Q9HBV1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.06■□□□□ 0.8
POPDC3Q9HBV1 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
POPDC3Q9HBV1 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
POPDC3Q9HBV1 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.06■□□□□ 0.8
POPDC3Q9HBV1 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.06■□□□□ 0.8
POPDC3Q9HBV1 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
POPDC3Q9HBV1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
POPDC3Q9HBV1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
POPDC3Q9HBV1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
POPDC3Q9HBV1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
POPDC3Q9HBV1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
POPDC3Q9HBV1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.06■□□□□ 0.8
POPDC3Q9HBV1 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.06■□□□□ 0.8
POPDC3Q9HBV1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
POPDC3Q9HBV1 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
POPDC3Q9HBV1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
POPDC3Q9HBV1 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
POPDC3Q9HBV1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
POPDC3Q9HBV1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
POPDC3Q9HBV1 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
POPDC3Q9HBV1 AC087633.2-202ENST00000565166 1439 ntBASIC20.05■□□□□ 0.8
POPDC3Q9HBV1 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
POPDC3Q9HBV1 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
POPDC3Q9HBV1 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
POPDC3Q9HBV1 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
POPDC3Q9HBV1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.05■□□□□ 0.8
POPDC3Q9HBV1 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
POPDC3Q9HBV1 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.05■□□□□ 0.8
POPDC3Q9HBV1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
POPDC3Q9HBV1 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.05■□□□□ 0.8
POPDC3Q9HBV1 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.05■□□□□ 0.8
POPDC3Q9HBV1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.05■□□□□ 0.8
POPDC3Q9HBV1 AC013268.1-206ENST00000638368 961 ntBASIC20.05■□□□□ 0.8
POPDC3Q9HBV1 AC112229.1-201ENST00000639295 961 ntBASIC20.05■□□□□ 0.8
POPDC3Q9HBV1 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
POPDC3Q9HBV1 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
POPDC3Q9HBV1 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
POPDC3Q9HBV1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
POPDC3Q9HBV1 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
POPDC3Q9HBV1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
POPDC3Q9HBV1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
POPDC3Q9HBV1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
POPDC3Q9HBV1 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POPDC3Q9HBV1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POPDC3Q9HBV1 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
POPDC3Q9HBV1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.04■□□□□ 0.8
POPDC3Q9HBV1 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
POPDC3Q9HBV1 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POPDC3Q9HBV1 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.04■□□□□ 0.8
POPDC3Q9HBV1 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.04■□□□□ 0.8
POPDC3Q9HBV1 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
POPDC3Q9HBV1 AC087623.3-201ENST00000607047 1098 ntBASIC20.04■□□□□ 0.8
POPDC3Q9HBV1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms