Protein–RNA interactions for Protein: Q9H4S2

GSX1, GS homeobox 1, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSX1Q9H4S2 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GSX1Q9H4S2 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GSX1Q9H4S2 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.31■□□□□ 0.36
GSX1Q9H4S2 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
GSX1Q9H4S2 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
GSX1Q9H4S2 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
GSX1Q9H4S2 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.3■□□□□ 0.36
GSX1Q9H4S2 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GSX1Q9H4S2 ECEL1P1-201ENST00000373592 1742 ntBASIC17.3■□□□□ 0.36
GSX1Q9H4S2 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GSX1Q9H4S2 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GSX1Q9H4S2 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GSX1Q9H4S2 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
GSX1Q9H4S2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GSX1Q9H4S2 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
GSX1Q9H4S2 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GSX1Q9H4S2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GSX1Q9H4S2 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
GSX1Q9H4S2 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GSX1Q9H4S2 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GSX1Q9H4S2 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.3■□□□□ 0.36
GSX1Q9H4S2 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
GSX1Q9H4S2 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
GSX1Q9H4S2 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.3■□□□□ 0.36
GSX1Q9H4S2 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GSX1Q9H4S2 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.3■□□□□ 0.36
GSX1Q9H4S2 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.3■□□□□ 0.36
GSX1Q9H4S2 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GSX1Q9H4S2 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GSX1Q9H4S2 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
GSX1Q9H4S2 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GSX1Q9H4S2 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.3■□□□□ 0.36
GSX1Q9H4S2 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GSX1Q9H4S2 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GSX1Q9H4S2 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GSX1Q9H4S2 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GSX1Q9H4S2 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GSX1Q9H4S2 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.29■□□□□ 0.36
GSX1Q9H4S2 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
GSX1Q9H4S2 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GSX1Q9H4S2 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GSX1Q9H4S2 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
GSX1Q9H4S2 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
GSX1Q9H4S2 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.29■□□□□ 0.36
GSX1Q9H4S2 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.29■□□□□ 0.36
GSX1Q9H4S2 AP001412.1-201ENST00000608405 714 ntBASIC17.29■□□□□ 0.36
GSX1Q9H4S2 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
GSX1Q9H4S2 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
GSX1Q9H4S2 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GSX1Q9H4S2 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.29■□□□□ 0.36
GSX1Q9H4S2 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.29■□□□□ 0.36
GSX1Q9H4S2 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GSX1Q9H4S2 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
GSX1Q9H4S2 POM121L13P-201ENST00000422362 380 ntBASIC17.28■□□□□ 0.36
GSX1Q9H4S2 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GSX1Q9H4S2 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
GSX1Q9H4S2 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.28■□□□□ 0.36
GSX1Q9H4S2 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GSX1Q9H4S2 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.28■□□□□ 0.36
GSX1Q9H4S2 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
GSX1Q9H4S2 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.28■□□□□ 0.36
GSX1Q9H4S2 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.28■□□□□ 0.36
GSX1Q9H4S2 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
GSX1Q9H4S2 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.28■□□□□ 0.36
GSX1Q9H4S2 AC113410.3-201ENST00000623366 203 ntBASIC17.28■□□□□ 0.36
GSX1Q9H4S2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
GSX1Q9H4S2 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
GSX1Q9H4S2 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GSX1Q9H4S2 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.28■□□□□ 0.36
GSX1Q9H4S2 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
GSX1Q9H4S2 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
GSX1Q9H4S2 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GSX1Q9H4S2 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.28■□□□□ 0.36
GSX1Q9H4S2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
GSX1Q9H4S2 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GSX1Q9H4S2 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GSX1Q9H4S2 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GSX1Q9H4S2 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GSX1Q9H4S2 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GSX1Q9H4S2 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GSX1Q9H4S2 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
GSX1Q9H4S2 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GSX1Q9H4S2 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GSX1Q9H4S2 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
GSX1Q9H4S2 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.27■□□□□ 0.36
GSX1Q9H4S2 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
GSX1Q9H4S2 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
GSX1Q9H4S2 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.27■□□□□ 0.36
GSX1Q9H4S2 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.27■□□□□ 0.36
GSX1Q9H4S2 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.36
GSX1Q9H4S2 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
GSX1Q9H4S2 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
GSX1Q9H4S2 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
GSX1Q9H4S2 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GSX1Q9H4S2 AC080038.3-201ENST00000623346 1952 ntBASIC17.27■□□□□ 0.36
GSX1Q9H4S2 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.27■□□□□ 0.35
GSX1Q9H4S2 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GSX1Q9H4S2 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
GSX1Q9H4S2 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.27■□□□□ 0.35
GSX1Q9H4S2 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms