Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
UPF3BQ9BZI7 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC24.33■■□□□ 1.49
UPF3BQ9BZI7 KRT19P1-201ENST00000405746 1186 ntBASIC24.33■■□□□ 1.49
UPF3BQ9BZI7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC24.33■■□□□ 1.49
UPF3BQ9BZI7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
UPF3BQ9BZI7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
UPF3BQ9BZI7 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC24.33■■□□□ 1.48
UPF3BQ9BZI7 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.48
UPF3BQ9BZI7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
UPF3BQ9BZI7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
UPF3BQ9BZI7 AC099778.1-201ENST00000568593 1911 ntBASIC24.32■■□□□ 1.48
UPF3BQ9BZI7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC24.32■■□□□ 1.48
UPF3BQ9BZI7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC24.32■■□□□ 1.48
UPF3BQ9BZI7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC24.32■■□□□ 1.48
UPF3BQ9BZI7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC24.32■■□□□ 1.48
UPF3BQ9BZI7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
UPF3BQ9BZI7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC24.32■■□□□ 1.48
UPF3BQ9BZI7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
UPF3BQ9BZI7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
UPF3BQ9BZI7 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
UPF3BQ9BZI7 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
UPF3BQ9BZI7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
UPF3BQ9BZI7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC24.31■■□□□ 1.48
UPF3BQ9BZI7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
UPF3BQ9BZI7 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC24.31■■□□□ 1.48
UPF3BQ9BZI7 NTF6G-201ENST00000591094 616 ntBASIC24.31■■□□□ 1.48
UPF3BQ9BZI7 AC243732.1-201ENST00000612648 864 ntBASIC24.31■■□□□ 1.48
UPF3BQ9BZI7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC24.31■■□□□ 1.48
UPF3BQ9BZI7 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
UPF3BQ9BZI7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC24.31■■□□□ 1.48
UPF3BQ9BZI7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC24.31■■□□□ 1.48
UPF3BQ9BZI7 AC092720.2-201ENST00000602388 1665 ntBASIC24.3■■□□□ 1.48
UPF3BQ9BZI7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
UPF3BQ9BZI7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
UPF3BQ9BZI7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
UPF3BQ9BZI7 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
UPF3BQ9BZI7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
UPF3BQ9BZI7 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
UPF3BQ9BZI7 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
UPF3BQ9BZI7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
UPF3BQ9BZI7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
UPF3BQ9BZI7 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC24.3■■□□□ 1.48
UPF3BQ9BZI7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
UPF3BQ9BZI7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC24.3■■□□□ 1.48
UPF3BQ9BZI7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC24.3■■□□□ 1.48
UPF3BQ9BZI7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC24.3■■□□□ 1.48
UPF3BQ9BZI7 SLC7A5P1-201ENST00000568957 537 ntBASIC24.3■■□□□ 1.48
UPF3BQ9BZI7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC24.3■■□□□ 1.48
UPF3BQ9BZI7 MIR2861-201ENST00000636310 90 ntBASIC24.3■■□□□ 1.48
UPF3BQ9BZI7 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
UPF3BQ9BZI7 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
UPF3BQ9BZI7 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
UPF3BQ9BZI7 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
UPF3BQ9BZI7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
UPF3BQ9BZI7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
UPF3BQ9BZI7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC24.3■■□□□ 1.48
UPF3BQ9BZI7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
UPF3BQ9BZI7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC24.29■■□□□ 1.48
UPF3BQ9BZI7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
UPF3BQ9BZI7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
UPF3BQ9BZI7 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC24.29■■□□□ 1.48
UPF3BQ9BZI7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC24.29■■□□□ 1.48
UPF3BQ9BZI7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
UPF3BQ9BZI7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
UPF3BQ9BZI7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC24.29■■□□□ 1.48
UPF3BQ9BZI7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
UPF3BQ9BZI7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
UPF3BQ9BZI7 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
UPF3BQ9BZI7 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
UPF3BQ9BZI7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
UPF3BQ9BZI7 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC24.28■■□□□ 1.48
UPF3BQ9BZI7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
UPF3BQ9BZI7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
UPF3BQ9BZI7 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
UPF3BQ9BZI7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC24.28■■□□□ 1.48
UPF3BQ9BZI7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC24.28■■□□□ 1.48
UPF3BQ9BZI7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
UPF3BQ9BZI7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
UPF3BQ9BZI7 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
UPF3BQ9BZI7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
UPF3BQ9BZI7 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
UPF3BQ9BZI7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
UPF3BQ9BZI7 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
UPF3BQ9BZI7 SMG8-203ENST00000578922 2178 ntBASIC24.27■■□□□ 1.48
UPF3BQ9BZI7 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
UPF3BQ9BZI7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC24.27■■□□□ 1.48
UPF3BQ9BZI7 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
UPF3BQ9BZI7 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
UPF3BQ9BZI7 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
UPF3BQ9BZI7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC24.27■■□□□ 1.48
UPF3BQ9BZI7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC24.27■■□□□ 1.48
UPF3BQ9BZI7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
UPF3BQ9BZI7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC24.27■■□□□ 1.48
UPF3BQ9BZI7 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC24.27■■□□□ 1.48
UPF3BQ9BZI7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
UPF3BQ9BZI7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
UPF3BQ9BZI7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC24.27■■□□□ 1.48
UPF3BQ9BZI7 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
UPF3BQ9BZI7 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
UPF3BQ9BZI7 MYCNOS-205ENST00000641950 531 ntBASIC24.27■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms