Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCGF1Q9BSM1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCGF1Q9BSM1 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCGF1Q9BSM1 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCGF1Q9BSM1 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.06■□□□□ 0.32
PCGF1Q9BSM1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCGF1Q9BSM1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.06■□□□□ 0.32
PCGF1Q9BSM1 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCGF1Q9BSM1 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCGF1Q9BSM1 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCGF1Q9BSM1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCGF1Q9BSM1 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCGF1Q9BSM1 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCGF1Q9BSM1 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.06■□□□□ 0.32
PCGF1Q9BSM1 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCGF1Q9BSM1 AL138781.1-201ENST00000566567 1274 ntBASIC17.06■□□□□ 0.32
PCGF1Q9BSM1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.06■□□□□ 0.32
PCGF1Q9BSM1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.06■□□□□ 0.32
PCGF1Q9BSM1 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.06■□□□□ 0.32
PCGF1Q9BSM1 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCGF1Q9BSM1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCGF1Q9BSM1 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PCGF1Q9BSM1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PCGF1Q9BSM1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.06■□□□□ 0.32
PCGF1Q9BSM1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCGF1Q9BSM1 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCGF1Q9BSM1 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PCGF1Q9BSM1 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
PCGF1Q9BSM1 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCGF1Q9BSM1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PCGF1Q9BSM1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCGF1Q9BSM1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.05■□□□□ 0.32
PCGF1Q9BSM1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCGF1Q9BSM1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCGF1Q9BSM1 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.05■□□□□ 0.32
PCGF1Q9BSM1 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.05■□□□□ 0.32
PCGF1Q9BSM1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCGF1Q9BSM1 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PCGF1Q9BSM1 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCGF1Q9BSM1 GUSBP6-202ENST00000438529 1198 ntBASIC17.05■□□□□ 0.32
PCGF1Q9BSM1 AC093787.1-201ENST00000450396 207 ntBASIC17.05■□□□□ 0.32
PCGF1Q9BSM1 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.05■□□□□ 0.32
PCGF1Q9BSM1 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.05■□□□□ 0.32
PCGF1Q9BSM1 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCGF1Q9BSM1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCGF1Q9BSM1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCGF1Q9BSM1 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.05■□□□□ 0.32
PCGF1Q9BSM1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.05■□□□□ 0.32
PCGF1Q9BSM1 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.05■□□□□ 0.32
PCGF1Q9BSM1 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCGF1Q9BSM1 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCGF1Q9BSM1 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCGF1Q9BSM1 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PCGF1Q9BSM1 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCGF1Q9BSM1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCGF1Q9BSM1 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.04■□□□□ 0.32
PCGF1Q9BSM1 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCGF1Q9BSM1 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCGF1Q9BSM1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PCGF1Q9BSM1 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PCGF1Q9BSM1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCGF1Q9BSM1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCGF1Q9BSM1 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCGF1Q9BSM1 CDV3P1-201ENST00000471403 739 ntBASIC17.04■□□□□ 0.32
PCGF1Q9BSM1 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.04■□□□□ 0.32
PCGF1Q9BSM1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PCGF1Q9BSM1 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.04■□□□□ 0.32
PCGF1Q9BSM1 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCGF1Q9BSM1 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCGF1Q9BSM1 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCGF1Q9BSM1 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCGF1Q9BSM1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.03■□□□□ 0.32
PCGF1Q9BSM1 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCGF1Q9BSM1 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCGF1Q9BSM1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.03■□□□□ 0.32
PCGF1Q9BSM1 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCGF1Q9BSM1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.03■□□□□ 0.32
PCGF1Q9BSM1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.03■□□□□ 0.32
PCGF1Q9BSM1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.03■□□□□ 0.32
PCGF1Q9BSM1 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.03■□□□□ 0.32
PCGF1Q9BSM1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCGF1Q9BSM1 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCGF1Q9BSM1 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PCGF1Q9BSM1 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCGF1Q9BSM1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCGF1Q9BSM1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.03■□□□□ 0.32
PCGF1Q9BSM1 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCGF1Q9BSM1 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCGF1Q9BSM1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PCGF1Q9BSM1 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.02■□□□□ 0.32
PCGF1Q9BSM1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCGF1Q9BSM1 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.02■□□□□ 0.32
PCGF1Q9BSM1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCGF1Q9BSM1 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.02■□□□□ 0.32
PCGF1Q9BSM1 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCGF1Q9BSM1 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
PCGF1Q9BSM1 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCGF1Q9BSM1 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PCGF1Q9BSM1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCGF1Q9BSM1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms