Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS1Q99742 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.59■□□□□ 0.57
NPAS1Q99742 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.59■□□□□ 0.57
NPAS1Q99742 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS1Q99742 AC133552.2-202ENST00000575694 574 ntBASIC18.59■□□□□ 0.57
NPAS1Q99742 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.59■□□□□ 0.57
NPAS1Q99742 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.59■□□□□ 0.57
NPAS1Q99742 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.59■□□□□ 0.57
NPAS1Q99742 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS1Q99742 AC027702.1-201ENST00000563810 1770 ntBASIC18.59■□□□□ 0.57
NPAS1Q99742 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.59■□□□□ 0.57
NPAS1Q99742 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS1Q99742 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS1Q99742 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
NPAS1Q99742 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
NPAS1Q99742 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
NPAS1Q99742 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
NPAS1Q99742 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NPAS1Q99742 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
NPAS1Q99742 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NPAS1Q99742 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
NPAS1Q99742 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NPAS1Q99742 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.58■□□□□ 0.57
NPAS1Q99742 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NPAS1Q99742 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NPAS1Q99742 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
NPAS1Q99742 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.58■□□□□ 0.57
NPAS1Q99742 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NPAS1Q99742 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.58■□□□□ 0.56
NPAS1Q99742 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.58■□□□□ 0.56
NPAS1Q99742 AF201337.1-201ENST00000520239 748 ntBASIC18.58■□□□□ 0.56
NPAS1Q99742 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.58■□□□□ 0.56
NPAS1Q99742 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.58■□□□□ 0.56
NPAS1Q99742 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.58■□□□□ 0.56
NPAS1Q99742 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.58■□□□□ 0.56
NPAS1Q99742 AC069236.1-201ENST00000604339 616 ntBASIC18.58■□□□□ 0.56
NPAS1Q99742 AL121832.2-201ENST00000610979 668 ntBASIC18.58■□□□□ 0.56
NPAS1Q99742 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPAS1Q99742 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPAS1Q99742 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.58■□□□□ 0.56
NPAS1Q99742 FP700111.2-201ENST00000619190 1892 ntBASIC18.58■□□□□ 0.56
NPAS1Q99742 CYP21A1P-202ENST00000354927 1481 ntBASIC18.58■□□□□ 0.56
NPAS1Q99742 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPAS1Q99742 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
NPAS1Q99742 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.58■□□□□ 0.56
NPAS1Q99742 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.58■□□□□ 0.56
NPAS1Q99742 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.57■□□□□ 0.56
NPAS1Q99742 AC010980.2-201ENST00000587099 1412 ntBASIC18.57■□□□□ 0.56
NPAS1Q99742 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NPAS1Q99742 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPAS1Q99742 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NPAS1Q99742 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
NPAS1Q99742 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPAS1Q99742 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPAS1Q99742 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.57■□□□□ 0.56
NPAS1Q99742 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.57■□□□□ 0.56
NPAS1Q99742 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPAS1Q99742 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
NPAS1Q99742 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.57■□□□□ 0.56
NPAS1Q99742 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
NPAS1Q99742 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.57■□□□□ 0.56
NPAS1Q99742 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.57■□□□□ 0.56
NPAS1Q99742 OR10C1-204ENST00000622521 1039 ntBASIC18.57■□□□□ 0.56
NPAS1Q99742 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.57■□□□□ 0.56
NPAS1Q99742 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NPAS1Q99742 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
NPAS1Q99742 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NPAS1Q99742 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.56■□□□□ 0.56
NPAS1Q99742 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
NPAS1Q99742 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NPAS1Q99742 AL157384.1-201ENST00000445995 2473 ntBASIC18.56■□□□□ 0.56
NPAS1Q99742 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NPAS1Q99742 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPAS1Q99742 HLA-L-209ENST00000420110 1011 ntBASIC18.56■□□□□ 0.56
NPAS1Q99742 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPAS1Q99742 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.56■□□□□ 0.56
NPAS1Q99742 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.56■□□□□ 0.56
NPAS1Q99742 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.56■□□□□ 0.56
NPAS1Q99742 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
NPAS1Q99742 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.56■□□□□ 0.56
NPAS1Q99742 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NPAS1Q99742 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.56■□□□□ 0.56
NPAS1Q99742 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.56■□□□□ 0.56
NPAS1Q99742 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPAS1Q99742 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPAS1Q99742 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NPAS1Q99742 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.56■□□□□ 0.56
NPAS1Q99742 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.55■□□□□ 0.56
NPAS1Q99742 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPAS1Q99742 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.55■□□□□ 0.56
NPAS1Q99742 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPAS1Q99742 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NPAS1Q99742 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPAS1Q99742 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.55■□□□□ 0.56
NPAS1Q99742 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPAS1Q99742 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
NPAS1Q99742 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NPAS1Q99742 GPX1P1-201ENST00000388829 606 ntBASIC18.55■□□□□ 0.56
NPAS1Q99742 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
NPAS1Q99742 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms